HHsearch alignment for GI: 254780623 and conserved domain: KOG1236
>KOG1236 consensus.
Probab=100.00 E-value=0 Score=527.85 Aligned_cols=376 Identities=22% Similarity=0.360 Sum_probs=348.6
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHH-HHHHHH
Q ss_conf 78999999960428999999997100459889999999887488789989999987540478-8999999867-666778
Q gi|254780623|r 53 SDRLARAMNRLGPSYVKMGQFLATRPDLIGKKLSEDLALLQDKMDFFPTNTARLSVASALKA-PIEELYCEFD-DPIAAA 130 (517)
Q Consensus 53 ~~rlr~~le~LGptfiKlGQ~lstR~Dllp~~~~~eL~~Lqd~vpp~~~~~v~~~ie~elg~-~~~~~F~~fd-ePlasA 130 (517)
T Consensus 121 ~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PIGsG 200 (565)
T KOG1236 121 LRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPIGSG 200 (565)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
T ss_conf 99999999752986687142002264316799999988875058987317789999999774748999873487655654
Q ss_pred HHHHHHHHHEEC-------------CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 888655550212-------------8887236876403104688777788999875321146854334691799999998
Q gi|254780623|r 131 SIAQVHPAVVHD-------------INGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQ 197 (517)
Q Consensus 131 SiaQVh~A~l~d-------------~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 197 (517)
T Consensus 201 ~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~-~vP~l~wL~l~~~vkqF~v 279 (565)
T KOG1236 201 CIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLIN-NVPDLSWLSLPLEVKQFSV 279 (565)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCHHHHHHH
T ss_conf 133455555418876313440231477653155411075678889999999852144555-4676311167205889999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCC-CHHHHHHHHHHHHHH
Q ss_conf 8788865599998898720244677664300001022178335300247863242677332002-256899999999999
Q gi|254780623|r 198 VTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGH-DLERLSVTLVQSFLL 276 (517)
Q Consensus 198 ~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~-d~~~la~~l~~~~~~ 276 (517)
T Consensus 280 ~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~Allk 359 (565)
T KOG1236 280 GLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVNALLK 359 (565)
T ss_pred HHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 98741006554431588987513535524776532134443122102455207765422227699999999877999999
Q ss_pred HHHHCCEECCCCCCCEEEEEC--C-----------------------------------------CCEEEEECCHHEECC
Q ss_conf 897448661787862289802--8-----------------------------------------953574340312169
Q gi|254780623|r 277 HTLRDGFFHADLHPGNLFVDS--K-----------------------------------------GYIVAVDMGITGRLS 313 (517)
Q Consensus 277 qi~~~GfFHaDPHpGNi~v~~--d-----------------------------------------g~i~~lDfG~vg~l~ 313 (517)
T Consensus 360 Ml~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lvflDtGiv~kLs 439 (565)
T KOG1236 360 MLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLVFLDTGIVTKLS 439 (565)
T ss_pred HHHHHCCEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCC
T ss_conf 99860001124577747998547875433332203566776435654556653332126534688749995230544047
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC-CCCHHHCCHHHHHHHHHHHHHHCCCC
Q ss_conf 89999999766999718727899999984126677893689999998521001-33433311356899999754527971
Q gi|254780623|r 314 KRERRFLAEILYGFISRDYQRVADVHFEAGYVPRHHNRFSFAQAIRAIGEPIH-GQSSDVISMGKLLTMLFEITELFDMM 392 (517)
Q Consensus 314 ~~~r~~l~~l~~a~~~~D~~~~~~~l~~lg~~~~~~d~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~ 392 (517)
T Consensus 440 ~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~st~sl~tl~i~~ll~em~tmvreH~V~ 519 (565)
T KOG1236 440 HQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARSTKSLRTLNIGDLLSEMFTMVREHHVR 519 (565)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEE
T ss_conf 14188799999999875152188999764501048988999999999999864204467476899999999999875242
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 2888999999999988499876889888999999999
Q gi|254780623|r 393 TRPELVMLQKTMVVVEGVARMLNPEFNMWVSSEPIVE 429 (517)
Q Consensus 393 ~P~~~~ll~r~l~~lEG~~~~LdP~~d~~~~~~p~~~ 429 (517)
T Consensus 520 ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l~ 556 (565)
T KOG1236 520 IDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLLN 556 (565)
T ss_pred ECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 0243377889999886224446998216664788999