HHsearch alignment for GI: 254780623 and conserved domain: PTZ00266
>PTZ00266 NIMA-related protein kinase; Provisional.
Probab=98.61 E-value=1.2e-07 Score=78.34 Aligned_cols=146 Identities=15% Similarity=0.228 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 15 e~IG~GsFG~VylAr~k~--Tg~~vAiK~I~~~~---------------------------l~-----~k~r~------~ 54 (484)
T PTZ00266 15 NRIGSGRFGEVFLVRHKH--TGQLFCWKVVAYKG---------------------------LS-----DKEKQ------Q 54 (484)
T ss_pred EEECCCCCEEEEEEEECC--CCCEEEEEEECHHH---------------------------CC-----HHHHH------H
T ss_conf 596247782999999878--99899999975566---------------------------79-----99999------9
Q ss_pred HHHHHHHHHHHHCCCCCCCC-CCCHHCCCHHCCC-CEEEEECCCCCCCCHHH-HH-HHHC-CCHH---HHHHHHHHH--H
Q ss_conf 59999889872024467766-4300001022178-33530024786324267-73-3200-2256---899999999--9
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQG-FRVPKIDWNRTER-DVITMEWIDGVKISDTE-KL-RACG-HDLE---RLSVTLVQS--F 274 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~-v~vP~vy~~~st~-~VLvmE~i~G~~i~d~~-~l-~~~~-~d~~---~la~~l~~~--~ 274 (517)
T Consensus 55 l~~Ei~ILk~L~H-----PnIVk~yd~f~d~~~~~lyIVMEYc~GGDL~~~I~~~~~~~~~l~E~~i~~i~~QLl~AL~y 129 (484)
T PTZ00266 55 LVMEVNVIRELNH-----PNIVRYIDRMIDKRRQLLYILMEYCDAGDLGENMRQFYKHYKLVNEQVIFDIALQLIFALAY 129 (484)
T ss_pred HHHHHHHHHHCCC-----CCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999999997799-----99973889999479998999994889981899999998606899999999999999999999
Q ss_pred HHHHH----HCCEECCCCCCCEEEEECCCC--------EEEEECCHHEECCHH
Q ss_conf 99897----448661787862289802895--------357434031216989
Q gi|254780623|r 275 LLHTL----RDGFFHADLHPGNLFVDSKGY--------IVAVDMGITGRLSKR 315 (517)
Q Consensus 275 ~~qi~----~~GfFHaDPHpGNi~v~~dg~--------i~~lDfG~vg~l~~~ 315 (517)
T Consensus 130 LH~~~~~~~s~~IIHRDLKPeNILL~~~~~~dg~~~~viKL~DFGLAk~l~~~ 182 (484)
T PTZ00266 130 CHNCKSGTKTGKVLHRDLKPQNILLSTKHNKDGNKSYVCKIGDFGLCRQIGMS 182 (484)
T ss_pred HHHCCCCCCCCCEECCCCCHHHEEECCCCCCCCCCCCCEEEEECCCCEECCCC
T ss_conf 97254434558876178877987853576656776750689765675157998