HHsearch alignment for GI: 254780623 and conserved domain: TIGR02721
>TIGR02721 ycfN_thiK thiamine kinase; InterPro: IPR014093 Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (ThiK), and additional proteobacterial homologues taken to be orthologs with equivalent function..
Probab=96.06 E-value=0.0046 Score=42.88 Aligned_cols=147 Identities=20% Similarity=0.189 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCC----HHHHHHH--------------------
Q ss_conf 6559999889872024467766430000102217833530024786324----2677332--------------------
Q gi|254780623|r 203 MDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERDVITMEWIDGVKIS----DTEKLRA-------------------- 258 (517)
Q Consensus 203 lD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~----d~~~l~~-------------------- 258 (517)
T Consensus 37 ~~R~rEy~~L~~l~~~------~laP~~~--~~~~~wllVEWL~G~v~~~dka~~~~l~~~~~~A~~l~~lh~~p~~g~p 108 (262)
T TIGR02721 37 VDRQREYAILQALSAV------KLAPKPI--LVNEHWLLVEWLEGEVITKDKAEFVALDLLGELAALLAQLHSQPRFGYP 108 (262)
T ss_pred CCHHHHHHHHHHHHHC------CCCCCEE--EECCCCEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 0258899999741305------7888447--7638716886048754135432355620013689999997105788887
Q ss_pred -----------HCCCHHH---HHHHHHHHHHHH----HHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHHHHHHH
Q ss_conf -----------0022568---999999999998----9744866178786228980289535743403121698999999
Q gi|254780623|r 259 -----------CGHDLER---LSVTLVQSFLLH----TLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKRERRFL 320 (517)
Q Consensus 259 -----------~~~d~~~---la~~l~~~~~~q----i~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~~r~~l 320 (517)
T Consensus 109 ~~l~~~~~~YW~~~dp~r~tp~~lr~~~~f~~~~~p~~l~laplH~Dvh~~Nlv~~~~G-~kLIDWEYA~dgDial--eL 185 (262)
T TIGR02721 109 LSLKARIAQYWLQIDPARRTPEWLRLYKQFRSAPEPAPLKLAPLHMDVHAYNLVVTPQG-LKLIDWEYASDGDIAL--EL 185 (262)
T ss_pred CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEECCCC-CEEEHHHCCCCCCHHH--HH
T ss_conf 24488999864650787256999999999964577440443003303464312445887-5353111103467789--99
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHH
Q ss_conf 9766999718727899999984126677-8936899999985
Q gi|254780623|r 321 AEILYGFISRDYQRVADVHFEAGYVPRH-HNRFSFAQAIRAI 361 (517)
Q Consensus 321 ~~l~~a~~~~D~~~~~~~l~~lg~~~~~-~d~~~~~~~i~~~ 361 (517)
T Consensus 186 a~~~~~n-~~d~~~~~~~~~~Yc~~~~~~~~~~~l~rqv~~W 226 (262)
T TIGR02721 186 AAIIRAN-HWDEEQQQDFVQRYCQRRRIYSDISRLKRQVKQW 226 (262)
T ss_pred HHHHHHH-CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
T ss_conf 9999971-3781689999999987621542589999998634