HHsearch alignment for GI: 254780623 and conserved domain: cd00180
>cd00180 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases of the serine or threonine-specific kinase subfamily. The enzymatic activity of these protein kinases is controlled by phosphorylation of specific residues in the activation segment of the catalytic domain, sometimes combined with reversible conformational changes in the C-terminal autoregulatory tail.
Probab=98.97 E-value=9.3e-10 Score=94.80 Aligned_cols=141 Identities=18% Similarity=0.242 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 6 ~~iG~G~fg~Vy~~~~~~--~~~~vAiK~i~~~~~~--------------------~--------~----~~------~~ 45 (256)
T cd00180 6 EKLGKGAFGKVYLARDKK--TGELVAIKIIKKKKEK--------------------K--------K----QV------ER 45 (256)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEECHHHCC--------------------H--------H----HH------HH
T ss_conf 898418784999999989--9989999998334489--------------------8--------9----99------99
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHC-CCH---HHHHHHHHHHHHHHH
Q ss_conf 599998898720244677664300001022178--33530024786324267733200-225---689999999999989
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACG-HDL---ERLSVTLVQSFLLHT 278 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~-~d~---~~la~~l~~~~~~qi 278 (517)
T Consensus 46 ~~~E~~il~~l~H-----pn--Iv~~~~~~~~~~~~~ivmEy~~gg~L~~~i--~~~~~l~~~~~~~i~~qi~~aL-~yl 115 (256)
T cd00180 46 ILREIKILKRLNH-----PN--IVKLYDVFEDEDKLYLVMEYMSGGDLFDLL--KKRGRLSEDEARFYFRQILSGL-EYL 115 (256)
T ss_pred HHHHHHHHHHCCC-----CC--CCCEEEEEEECCEEEEEEECCCCCCHHHHH--HHCCCCCHHHHHHHHHHHHHHH-HHH
T ss_conf 9999999997799-----69--995999999899999999788998689999--8769999999999999999999-999
Q ss_pred HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf 7448661787862289802895357434031216989
Q gi|254780623|r 279 LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR 315 (517)
Q Consensus 279 ~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~ 315 (517)
T Consensus 116 H~~~iiHRDiKp~NILl~~~~~vKL~DFGla~~~~~~ 152 (256)
T cd00180 116 HSKGIIHRDLKPENILLDEDGHVKIADFGLAKQLDSG 152 (256)
T ss_pred HHCCCEEEECCHHHEEECCCCCEEEEECCCCEECCCC
T ss_conf 9899677445779879989998999978886576789