HHsearch alignment for GI: 254780623 and conserved domain: cd05082

>cd05082 PTKc_Csk Catalytic Domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.70  E-value=9.5e-08  Score=79.20  Aligned_cols=144  Identities=19%  Similarity=0.228  Sum_probs=90.4

Q ss_pred             HHHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             99867--6667788886555502128887236876403104688777788999875321146854334691799999998
Q gi|254780623|r  120 YCEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQ  197 (517)
Q Consensus       120 F~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~  197 (517)
T Consensus         5 ~~~~~~~~~iG~G~fg~V~~~~~~----g~~vAvK~i~~--------~------------------------~~~~----   44 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKN--------D------------------------ATAQ----   44 (256)
T ss_pred             HHHEEEEEEEEECCCCEEEEEEEC----CEEEEEEEECC--------C------------------------CCHH----
T ss_conf             799797459820898389999989----93999999787--------3------------------------0599----


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHH-CCCHH---HHHHHHHHH
Q ss_conf             87888655999988987202446776643000010221783353002478632426773320-02256---899999999
Q gi|254780623|r  198 VTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRAC-GHDLE---RLSVTLVQS  273 (517)
Q Consensus       198 ~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~-~~d~~---~la~~l~~~  273 (517)
T Consensus        45 ------~f~~E~~~l~~l~Hp----nIv~~~g~~~~~~~~~~iv~Ey~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~g  114 (256)
T cd05082          45 ------AFLAEASVMTQLRHS----NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA  114 (256)
T ss_pred             ------HHHHHHHHHHHCCCC----CCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf             ------999999999857998----9880999999379829999974899978998865699779999999999999999


Q ss_pred             HHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf             99989744866178786228980289535743403121698
Q gi|254780623|r  274 FLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK  314 (517)
Q Consensus       274 ~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~  314 (517)
T Consensus       115 -l~yLH~~~iiHrDlK~~NiLv~~~~~~Kl~DFGls~~~~~  154 (256)
T cd05082         115 -MEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  154 (256)
T ss_pred             -HHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCC
T ss_conf             -9999739937775776228898999289800577707777