HHsearch alignment for GI: 254780623 and conserved domain: cd05082
>cd05082 PTKc_Csk Catalytic Domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.70 E-value=9.5e-08 Score=79.20 Aligned_cols=144 Identities=19% Similarity=0.228 Sum_probs=90.4
Q ss_pred HHHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99867--6667788886555502128887236876403104688777788999875321146854334691799999998
Q gi|254780623|r 120 YCEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQ 197 (517)
Q Consensus 120 F~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 197 (517)
T Consensus 5 ~~~~~~~~~iG~G~fg~V~~~~~~----g~~vAvK~i~~--------~------------------------~~~~---- 44 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKN--------D------------------------ATAQ---- 44 (256)
T ss_pred HHHEEEEEEEEECCCCEEEEEEEC----CEEEEEEEECC--------C------------------------CCHH----
T ss_conf 799797459820898389999989----93999999787--------3------------------------0599----
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHH-CCCHH---HHHHHHHHH
Q ss_conf 87888655999988987202446776643000010221783353002478632426773320-02256---899999999
Q gi|254780623|r 198 VTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRAC-GHDLE---RLSVTLVQS 273 (517)
Q Consensus 198 ~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~-~~d~~---~la~~l~~~ 273 (517)
T Consensus 45 ------~f~~E~~~l~~l~Hp----nIv~~~g~~~~~~~~~~iv~Ey~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~g 114 (256)
T cd05082 45 ------AFLAEASVMTQLRHS----NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114 (256)
T ss_pred ------HHHHHHHHHHHCCCC----CCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf ------999999999857998----9880999999379829999974899978998865699779999999999999999
Q ss_pred HHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 99989744866178786228980289535743403121698
Q gi|254780623|r 274 FLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 274 ~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 115 -l~yLH~~~iiHrDlK~~NiLv~~~~~~Kl~DFGls~~~~~ 154 (256)
T cd05082 115 -MEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred -HHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCC
T ss_conf -9999739937775776228898999289800577707777