HHsearch alignment for GI: 254780623 and conserved domain: cd05084
>cd05084 PTKc_Fes Catalytic Domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=98.63 E-value=2e-07 Score=76.71 Aligned_cols=138 Identities=18% Similarity=0.201 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 66778888655550212888723687640310468877778899987532114685433469179999999887888655
Q gi|254780623|r 126 PIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDL 205 (517)
Q Consensus 126 PlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~ 205 (517)
T Consensus 2 ~iG~G~fg~Vy~~~~~~--~~~~vAiK~~~~~~~----~-----------------------------~~------~~~~ 40 (252)
T cd05084 2 RIGRGNFGEVFSGRLRA--DNTPVAVKSCRETLP----P-----------------------------EL------KAKF 40 (252)
T ss_pred CCCCCCCCEEEEEEECC--CCEEEEEEEECCCCC----H-----------------------------HH------HHHH
T ss_conf 07458882899999979--996999999881169----8-----------------------------89------9999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHCCCHH---HHHHHHHHHHHHHHHH
Q ss_conf 99998898720244677664300001022178--335300247863242677332002256---8999999999998974
Q gi|254780623|r 206 RLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACGHDLE---RLSVTLVQSFLLHTLR 280 (517)
Q Consensus 206 ~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~~d~~---~la~~l~~~~~~qi~~ 280 (517)
T Consensus 41 ~~E~~il~~l~H-----pnI--v~l~g~~~~~~~~~lv~Ey~~~G~L~~~l~~~~~~l~~~~~~~i~~~ia~g-l~yLH~ 112 (252)
T cd05084 41 LMEARILKQYSH-----PNI--VKLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIRMAENAAAG-MEYLES 112 (252)
T ss_pred HHHHHHHHHCCC-----CCC--CCEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH-HHHHHH
T ss_conf 999999985799-----899--765479988998999997899992899998428999999999999999999-999987
Q ss_pred CCEECCCCCCCEEEEECCCCEEEEECCHHEEC
Q ss_conf 48661787862289802895357434031216
Q gi|254780623|r 281 DGFFHADLHPGNLFVDSKGYIVAVDMGITGRL 312 (517)
Q Consensus 281 ~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l 312 (517)
T Consensus 113 ~~ivHrDlKp~NiLl~~~~~~kl~DFGla~~~ 144 (252)
T cd05084 113 KHCIHRDLAARNCLVTEKNVLKISDFGMSREE 144 (252)
T ss_pred CCCCCCCCCHHHEEECCCCEEEEEECCCCEEC
T ss_conf 89446873654289879992999555256056