>cd05090 PTKc_Ror1 Catalytic Domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like orphan receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

Probab=98.67 E-value=3.8e-08 Score=82.26 Aligned_cols=145 Identities=12% Similarity=0.206 Sum_probs=90.0 Q ss_pred HHHHHHHHHHHHHHHHHHEE--CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 86766677888865555021--2888723687640310468877778899987532114685433469179999999887 Q gi|254780623|r 122 EFDDPIAAASIAQVHPAVVH--DINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVT 199 (517) Q Consensus 122 ~fdePlasASiaQVh~A~l~--d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l 199 (517) T Consensus 8 ~~~~~IG~G~fG~Vykg~~~~~~~~~~~~VAiK~l~~~~~---------------------~--------~--------- 49 (283) T cd05090 8 RFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN---------------------P--------Q--------- 49 (283) T ss_pred EEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEECCCCC---------------------H--------H--------- T ss_conf 9987970485869999999478885888999999788789---------------------7--------8--------- Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCC---CCEEEEECCCCCCCCHHHHHHH----------------HC Q ss_conf 8886559999889872024467766430000102217---8335300247863242677332----------------00 Q gi|254780623|r 200 KMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTE---RDVITMEWIDGVKISDTEKLRA----------------CG 260 (517) Q Consensus 200 ~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st---~~VLvmE~i~G~~i~d~~~l~~----------------~~ 260 (517) T Consensus 50 -~~~~f~~E~~~l~~l~H-----pNIV--~l~g-~~~~~~~~~iv~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~~ 120 (283) T cd05090 50 -QWGEFQQEASLMAELHH-----PNIV--CLLG-VVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSS 120 (283) T ss_pred -HHHHHHHHHHHHHHCCC-----CCCC--EEEE-EEEECCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC T ss_conf -99999999999986689-----8968--5999-9988997799999459990899997507654333332223321357 Q ss_pred CCH---HHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH Q ss_conf 225---689999999999989744866178786228980289535743403121698 Q gi|254780623|r 261 HDL---ERLSVTLVQSFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517) Q Consensus 261 ~d~---~~la~~l~~~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517) T Consensus 121 l~~~~~~~i~~qia~g-l~yLH~~~iiHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~ 176 (283) T cd05090 121 LDHGDFLHIAIQIAAG-MEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYS 176 (283) T ss_pred CCHHHHHHHHHHHHHH-HHHHHHCCEECCCCCHHHEEECCCCCEEEEECCCCEECCC T ss_conf 8999999999999999-9998449856450484127688999899981667726567

HHsearch alignment for GI: 254780623 and conserved domain: cd05090