>cd05091 PTKc_Ror2 Catalytic Domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like orphan receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

Probab=98.60 E-value=5.8e-07 Score=73.13 Aligned_cols=148 Identities=11% Similarity=0.124 Sum_probs=90.9 Q ss_pred HHHH--HHHHHHHHHHHHHHHEEC---CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH Q ss_conf 9867--666778888655550212---88872368764031046887777889998753211468543346917999999 Q gi|254780623|r 121 CEFD--DPIAAASIAQVHPAVVHD---INGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRAL 195 (517) Q Consensus 121 ~~fd--ePlasASiaQVh~A~l~d---~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~ 195 (517) T Consensus 5 ~~~~~~e~IG~G~fG~Vykg~~~~~~~~~~~~~VAiK~l~~~~~~~---------------------------------- 50 (283) T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGP---------------------------------- 50 (283) T ss_pred HHEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCHH---------------------------------- T ss_conf 9979998971588849999998788778777699999978115868---------------------------------- Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHC---CCCEEEEECCCCCCCCHHHHHHHH------------- Q ss_conf 9887888655999988987202446776643000010221---783353002478632426773320------------- Q gi|254780623|r 196 EQVTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRT---ERDVITMEWIDGVKISDTEKLRAC------------- 259 (517) Q Consensus 196 ~~~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~s---t~~VLvmE~i~G~~i~d~~~l~~~------------- 259 (517) T Consensus 51 ---~~~--~f~~E~~~l~~l~H-----pNIv--~~~G-~~~~~~~~~lv~e~~~~G~L~~~L~~~~~~~~~~~~~~~~~~ 117 (283) T cd05091 51 ---LRE--EFRHEAMLRSRLQH-----PNIV--CLLG-VVTKEQPMSMIFSYSSHGDLHEFLVMRSPHSDVGSTDDDKTV 117 (283) T ss_pred ---HHH--HHHHHHHHHHHCCC-----CCCC--CEEE-EEEECCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHH T ss_conf ---999--99999999981899-----8988--3989-997689029999906899189999760654433444321010 Q ss_pred --CCCHH---HHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHHH Q ss_conf --02256---8999999999998974486617878622898028953574340312169899 Q gi|254780623|r 260 --GHDLE---RLSVTLVQSFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKRE 316 (517) Q Consensus 260 --~~d~~---~la~~l~~~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~~ 316 (517) T Consensus 118 ~~~l~~~~~~~i~~qia~g-l~yLH~~~ivHrDlK~~NILl~~~~~vKl~DFGls~~~~~~~ 178 (283) T cd05091 118 KSTLEPADFLHIVTQIAAG-MEFLSSHHVVHKDLAARNVLVFDKLNVKISDLGLFREVYSAD 178 (283) T ss_pred CCCCCHHHHHHHHHHHHHH-HHHHHHCCCCCCCCCCCEEEECCCCCEEEEECCCCEECCCCC T ss_conf 1478999999999999999-999976992678676024898799968997547761556776

HHsearch alignment for GI: 254780623 and conserved domain: cd05091