HHsearch alignment for GI: 254780623 and conserved domain: cd05112

>cd05112 PTKc_Itk Catalytic Domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=98.91  E-value=4e-09  Score=89.88  Aligned_cols=136  Identities=19%  Similarity=0.240  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r  125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD  204 (517)
Q Consensus       125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD  204 (517)
T Consensus        10 ~~iG~G~fg~Vy~~~~~~---~~~VAvK~~~~~~---------------------------~~--------------~~~   45 (256)
T cd05112          10 QEIGSGQFGLVWLGYWLE---KRKVAIKTIREGA---------------------------MS--------------EED   45 (256)
T ss_pred             EEEECCCCCEEEEEEECC---CCEEEEEEECCCC---------------------------CC--------------HHH
T ss_conf             898058585999999879---9999999988687---------------------------88--------------899


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCHHCCCHH--CCCCEEEEECCCCCCCCHHHHHHHHCCCHH---HHHHHHHHHHHHHHH
Q ss_conf             599998898720244677664300001022--178335300247863242677332002256---899999999999897
Q gi|254780623|r  205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNR--TERDVITMEWIDGVKISDTEKLRACGHDLE---RLSVTLVQSFLLHTL  279 (517)
Q Consensus       205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~--st~~VLvmE~i~G~~i~d~~~l~~~~~d~~---~la~~l~~~~~~qi~  279 (517)
T Consensus        46 f~~E~~~l~~l~H-----pn--Iv~~~g~~~~~~~~~iv~Ey~~~G~L~~~l~~~~~~~~~~~~~~i~~~ia~g-l~yLH  117 (256)
T cd05112          46 FIEEAQVMMKLSH-----PK--LVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEG-MAYLE  117 (256)
T ss_pred             HHHHHHHHHHCCC-----CC--CCCCCEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH-HHHHH
T ss_conf             9999999997699-----98--9040317721998999996689998899997547999999999999999999-99983


Q ss_pred             HCCEECCCCCCCEEEEECCCCEEEEECCHHEEC
Q ss_conf             448661787862289802895357434031216
Q gi|254780623|r  280 RDGFFHADLHPGNLFVDSKGYIVAVDMGITGRL  312 (517)
Q Consensus       280 ~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l  312 (517)
T Consensus       118 ~~~iiHrDlk~~NiLl~~~~~~Kl~DFGls~~~  150 (256)
T cd05112         118 SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFV  150 (256)
T ss_pred             HCCEECCCCCCCEEEECCCCCEEEEECCCCEEC
T ss_conf             689156757716389989998999626875055