HHsearch alignment for GI: 254780623 and conserved domain: cd05112
>cd05112 PTKc_Itk Catalytic Domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=98.91 E-value=4e-09 Score=89.88 Aligned_cols=136 Identities=19% Similarity=0.240 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 10 ~~iG~G~fg~Vy~~~~~~---~~~VAvK~~~~~~---------------------------~~--------------~~~ 45 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLE---KRKVAIKTIREGA---------------------------MS--------------EED 45 (256)
T ss_pred EEEECCCCCEEEEEEECC---CCEEEEEEECCCC---------------------------CC--------------HHH
T ss_conf 898058585999999879---9999999988687---------------------------88--------------899
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHH--CCCCEEEEECCCCCCCCHHHHHHHHCCCHH---HHHHHHHHHHHHHHH
Q ss_conf 599998898720244677664300001022--178335300247863242677332002256---899999999999897
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNR--TERDVITMEWIDGVKISDTEKLRACGHDLE---RLSVTLVQSFLLHTL 279 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~--st~~VLvmE~i~G~~i~d~~~l~~~~~d~~---~la~~l~~~~~~qi~ 279 (517)
T Consensus 46 f~~E~~~l~~l~H-----pn--Iv~~~g~~~~~~~~~iv~Ey~~~G~L~~~l~~~~~~~~~~~~~~i~~~ia~g-l~yLH 117 (256)
T cd05112 46 FIEEAQVMMKLSH-----PK--LVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEG-MAYLE 117 (256)
T ss_pred HHHHHHHHHHCCC-----CC--CCCCCEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH-HHHHH
T ss_conf 9999999997699-----98--9040317721998999996689998899997547999999999999999999-99983
Q ss_pred HCCEECCCCCCCEEEEECCCCEEEEECCHHEEC
Q ss_conf 448661787862289802895357434031216
Q gi|254780623|r 280 RDGFFHADLHPGNLFVDSKGYIVAVDMGITGRL 312 (517)
Q Consensus 280 ~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l 312 (517)
T Consensus 118 ~~~iiHrDlk~~NiLl~~~~~~Kl~DFGls~~~ 150 (256)
T cd05112 118 SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFV 150 (256)
T ss_pred HCCEECCCCCCCEEEECCCCCEEEEECCCCEEC
T ss_conf 689156757716389989998999626875055