HHsearch alignment for GI: 254780623 and conserved domain: cd05150

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.13  E-value=0.00013  Score=54.79  Aligned_cols=77  Identities=16%  Similarity=0.196  Sum_probs=50.2

Q ss_pred             CEECCCCCCCEEEEECCCCE-EEEECCHHEECCHHHHHHHHHHHHHHHCCC-HHHHHHHHHH-HHCCCCCCCHHHHHHHH
Q ss_conf             86617878622898028953-574340312169899999997669997187-2789999998-41266778936899999
Q gi|254780623|r  282 GFFHADLHPGNLFVDSKGYI-VAVDMGITGRLSKRERRFLAEILYGFISRD-YQRVADVHFE-AGYVPRHHNRFSFAQAI  358 (517)
Q Consensus       282 GfFHaDPHpGNi~v~~dg~i-~~lDfG~vg~l~~~~r~~l~~l~~a~~~~D-~~~~~~~l~~-lg~~~~~~d~~~~~~~i  358 (517)
T Consensus       164 v~~HGD~~~~N~l~~~-~~~~g~iD~~~~g~aDr~~DLa~--~~~sl~~n~~~~~~~~~Fl~~YG~~~~D~~rl~~y~lL  240 (244)
T cd05150         164 VVTHGDACLPNIIVDP-GKFSGFIDLGRLGVADRYQDLAL--AVRSLRENLGGEEYAARFLDRYGIDAPDPEKLAYYRLL  240 (244)
T ss_pred             EEECCCCCCCCEEEEC-CEEEEEEECCCCCCCCHHHHHHH--HHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf             7877888888889858-91899997666677777999999--99677530698389999999809998998999999988


Q ss_pred             HHH
Q ss_conf             985
Q gi|254780623|r  359 RAI  361 (517)
Q Consensus       359 ~~~  361 (517)
T Consensus       241 DEf  243 (244)
T cd05150         241 DEF  243 (244)
T ss_pred             HHH
T ss_conf             743