HHsearch alignment for GI: 254780623 and conserved domain: cd05574

>cd05574 STKc_phototropin_like STKc_phototropin_like: Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalyti
Probab=98.80  E-value=1.2e-08  Score=86.15  Aligned_cols=141  Identities=12%  Similarity=0.179  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r  125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD  204 (517)
Q Consensus       125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD  204 (517)
T Consensus         7 ~~LG~G~fg~V~~~~~~~--t~~~~AiK~i~k~~~--------------------~~-------~~~~----~~~-----   48 (315)
T cd05574           7 KLLGKGDVGRVYLVRLKG--TGKLFALKVLDKKEM--------------------IK-------RNKV----KRV-----   48 (315)
T ss_pred             EEEECCCCEEEEEEEECC--CCCEEEEEEEEHHHC--------------------CC-------HHHH----HHH-----
T ss_conf             880128891999999999--998999999837886--------------------68-------7899----999-----


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCC--EEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH---
Q ss_conf             5999988987202446776643000010221783--35300247863242677332002256899999999999897---
Q gi|254780623|r  205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERD--VITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHTL---  279 (517)
Q Consensus       205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~--VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi~---  279 (517)
T Consensus        49 -~~E~~il~~l~-----Hpn--Iv~l~~~~~~~~~~ylvmE~~~gG~L~~~l~~~~~~----~l~e~~~~~~~~qil~al  116 (315)
T cd05574          49 -LTEQEILATLD-----HPF--LPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGK----CFPEEVARFYAAEVLLAL  116 (315)
T ss_pred             -HHHHHHHHHCC-----CCC--CCEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCC----CCCHHHHHHHHHHHHHHH
T ss_conf             -99999998779-----989--990999998899899999778998389999860489----999999999999999999


Q ss_pred             ----HCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf             ----448661787862289802895357434031216989
Q gi|254780623|r  280 ----RDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR  315 (517)
Q Consensus       280 ----~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~  315 (517)
T Consensus       117 ~ylH~~~IvHRDlKPeNILl~~~g~vkl~DFgls~~~~~~  156 (315)
T cd05574         117 EYLHLLGIVYRDLKPENILLHEDGHIMLSDFDLSKQSDVE  156 (315)
T ss_pred             HHHHHCCEEEEECCHHEEEECCCCCEEEEECCCCEECCCC
T ss_conf             9998587886204521079979997899546863233767