HHsearch alignment for GI: 254780623 and conserved domain: cd05574
>cd05574 STKc_phototropin_like STKc_phototropin_like: Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalyti
Probab=98.80 E-value=1.2e-08 Score=86.15 Aligned_cols=141 Identities=12% Similarity=0.179 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 7 ~~LG~G~fg~V~~~~~~~--t~~~~AiK~i~k~~~--------------------~~-------~~~~----~~~----- 48 (315)
T cd05574 7 KLLGKGDVGRVYLVRLKG--TGKLFALKVLDKKEM--------------------IK-------RNKV----KRV----- 48 (315)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEEEHHHC--------------------CC-------HHHH----HHH-----
T ss_conf 880128891999999999--998999999837886--------------------68-------7899----999-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCC--EEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH---
Q ss_conf 5999988987202446776643000010221783--35300247863242677332002256899999999999897---
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERD--VITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHTL--- 279 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~--VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi~--- 279 (517)
T Consensus 49 -~~E~~il~~l~-----Hpn--Iv~l~~~~~~~~~~ylvmE~~~gG~L~~~l~~~~~~----~l~e~~~~~~~~qil~al 116 (315)
T cd05574 49 -LTEQEILATLD-----HPF--LPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGK----CFPEEVARFYAAEVLLAL 116 (315)
T ss_pred -HHHHHHHHHCC-----CCC--CCEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCC----CCCHHHHHHHHHHHHHHH
T ss_conf -99999998779-----989--990999998899899999778998389999860489----999999999999999999
Q ss_pred ----HCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf ----448661787862289802895357434031216989
Q gi|254780623|r 280 ----RDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR 315 (517)
Q Consensus 280 ----~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~ 315 (517)
T Consensus 117 ~ylH~~~IvHRDlKPeNILl~~~g~vkl~DFgls~~~~~~ 156 (315)
T cd05574 117 EYLHLLGIVYRDLKPENILLHEDGHIMLSDFDLSKQSDVE 156 (315)
T ss_pred HHHHHCCEEEEECCHHEEEECCCCCEEEEECCCCEECCCC
T ss_conf 9998587886204521079979997899546863233767