HHsearch alignment for GI: 254780623 and conserved domain: cd05576

>cd05576 STKc_RPK118_like STKc_RPK118_like: Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118
Probab=98.43  E-value=2.4e-07  Score=76.07  Aligned_cols=125  Identities=14%  Similarity=0.151  Sum_probs=74.8

Q ss_pred             HHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88886555502128887236876403104688777788999875321146854334691799999998878886559999
Q gi|254780623|r  130 ASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDLRLEA  209 (517)
Q Consensus       130 ASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~~~Ea  209 (517)
T Consensus         4 G~fg~V~l~~~~~--t~~~~AiK~i~k~~--~~-------------------------------------------~~e~   36 (237)
T cd05576           4 GVIDKVLLVMDTR--TQQTFILKGLRKSS--EY-------------------------------------------SRER   36 (237)
T ss_pred             CCCCEEEEEEECC--CCCEEEEEEECHHH--HH-------------------------------------------HHHH
T ss_conf             8675899999879--99999999981415--57-------------------------------------------7999


Q ss_pred             HHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH-------HHH
Q ss_conf             8898720244677664300001022178--3353002478632426773320022568999999999998-------974
Q gi|254780623|r  210 AAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLH-------TLR  280 (517)
Q Consensus       210 ~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~q-------i~~  280 (517)
T Consensus        37 ~~l~~~-----~~p~--Iv~l~~~~~~~~~~ylvmEy~~gg~L~~~i--~~~~----~l~e~~~~~~~~qll~al~~lH~  103 (237)
T cd05576          37 LTIIPH-----CVPN--MVCLHKYIVSEDSVFLVLQHAEGGKLWSHI--SKFL----NIPEECVKRWAAEMVVALDALHR  103 (237)
T ss_pred             HHHHHC-----CCCC--CCEEEEEEEECCEEEEEEECCCCCCHHHHH--HHCC----CCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             999970-----8998--676999999899999999577999489999--8759----99999999999999999999997


Q ss_pred             CCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf             4866178786228980289535743403121698
Q gi|254780623|r  281 DGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK  314 (517)
Q Consensus       281 ~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~  314 (517)
T Consensus       104 ~~ivHrDiKPeNill~~~~~ikl~dfg~~~~~~~  137 (237)
T cd05576         104 EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVED  137 (237)
T ss_pred             CCEEEEECCCCEEEECCCCCEEEEECCCCHHCCC
T ss_conf             8967511564317887999799976465143155