HHsearch alignment for GI: 254780623 and conserved domain: cd05581
>cd05581 STKc_PDK1 STKc_PDK1: Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential fo
Probab=98.91 E-value=8.4e-09 Score=87.39 Aligned_cols=143 Identities=16% Similarity=0.303 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 7 ~~iG~G~fg~V~~a~~~~--tg~~vAvK~i~~~~~---~--------------~---~-----------~~~~~~----- 48 (279)
T cd05581 7 KILGEGSFSTVYLAKEKE--TNKEYAIKVLDKRHL---I--------------K---E-----------KKVKYV----- 48 (279)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEECHHHC---C--------------C---H-----------HHHHHH-----
T ss_conf 797327790999999889--998999999807890---5--------------6---7-----------789999-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCC--EEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH-----
Q ss_conf 5999988987202446776643000010221783--353002478632426773320022568999999999998-----
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERD--VITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLH----- 277 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~--VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~q----- 277 (517)
T Consensus 49 -~~E~~il~~l~----~Hp~--Iv~l~~~~~~~~~~yivmE~~~gG~L~~~--l~~~~~----l~e~~~~~~~~qi~~gL 115 (279)
T cd05581 49 -KREKEVLTRLN----GHPG--IVKLYYTFQDEENLYFVLEYAENGELLEY--IKKFGS----FDEKCTRFYTAEILLAL 115 (279)
T ss_pred -HHHHHHHHHCC----CCCC--CCEEEEEEEECCEEEEEEECCCCCCHHHH--HHHCCC----CCHHHHHHHHHHHHHHH
T ss_conf -99999998427----9989--78399999989999999948899878999--987699----89999999999999999
Q ss_pred --HHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHHHHH
Q ss_conf --97448661787862289802895357434031216989999
Q gi|254780623|r 278 --TLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKRERR 318 (517)
Q Consensus 278 --i~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~~r~ 318 (517)
T Consensus 116 ~~lH~~~ivHRDiKpeNILl~~~g~~kl~DFG~a~~~~~~~~~ 158 (279)
T cd05581 116 EYLHSKGIIHRDLKPENILLDKDGHIKITDFGTAKVLDPNSSP 158 (279)
T ss_pred HHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCCCCC
T ss_conf 9999888630547466679989998899227665466776543