HHsearch alignment for GI: 254780623 and conserved domain: cd05590
>cd05590 STKc_nPKC_eta STKc_nPKC_eta: Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro
Probab=98.67 E-value=7.8e-08 Score=79.88 Aligned_cols=137 Identities=18% Similarity=0.211 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 67788886555502128887236876403104688777788999875321146854334691799999998878886559
Q gi|254780623|r 127 IAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDLR 206 (517)
Q Consensus 127 lasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~~ 206 (517)
T Consensus 3 LG~G~fG~V~~a~~~~--tg~~~AiK~i~k~~~----------------~~-------~~~--------~~~~~------ 43 (320)
T cd05590 3 LGKGSFGKVMLARLKE--SGRLYAVKVLKKDVI----------------LQ-------DDD--------VECTM------ 43 (320)
T ss_pred EEECCCCEEEEEEECC--CCCEEEEEEEEHHHC----------------CC-------HHH--------HHHHH------
T ss_conf 1118791999999999--998999999807884----------------38-------478--------99999------
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHC-CCH---HHHHHHHHHHHHHHHHH
Q ss_conf 9998898720244677664300001022178--33530024786324267733200-225---68999999999998974
Q gi|254780623|r 207 LEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACG-HDL---ERLSVTLVQSFLLHTLR 280 (517)
Q Consensus 207 ~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~-~d~---~~la~~l~~~~~~qi~~ 280 (517)
T Consensus 44 ~E~~il~~~~----~hp--~Iv~l~~~f~~~~~~ylvmEy~~gGdL~~~--l~~~~~l~e~~a~~~~~qi~~a-L~yLH~ 114 (320)
T cd05590 44 TEKRILSLAR----NHP--FLTQLYCCFQTPDRLFFVMEFVNGGDLMFH--IQKSRRFDEARARFYAAEITSA-LMFLHD 114 (320)
T ss_pred HHHHHHHHHC----CCC--CEEEEEEEEEECCEEEEEEECCCCCCHHHH--HHHCCCCCHHHHHHHHHHHHHH-HHHHHH
T ss_conf 9999999727----999--786699999989999999976799879999--9743899999999999999999-999987
Q ss_pred CCEECCCCCCCEEEEECCCCEEEEECCHHEE
Q ss_conf 4866178786228980289535743403121
Q gi|254780623|r 281 DGFFHADLHPGNLFVDSKGYIVAVDMGITGR 311 (517)
Q Consensus 281 ~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~ 311 (517)
T Consensus 115 ~gIiHRDLKPeNILl~~~g~iKL~DFGlak~ 145 (320)
T cd05590 115 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 145 (320)
T ss_pred CCEEECCCCCCCCEECCCCCEEECCHHHHHH
T ss_conf 8907622467534574689889704135343