HHsearch alignment for GI: 254780623 and conserved domain: cd05608
>cd05608 STKc_GRK1 STKc_GRK1: Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod
Probab=98.73 E-value=4.4e-08 Score=81.84 Aligned_cols=141 Identities=14% Similarity=0.227 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 67788886555502128887236876403104688777788999875321146854334691799999998878886559
Q gi|254780623|r 127 IAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDLR 206 (517)
Q Consensus 127 lasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~~ 206 (517)
T Consensus 1 LG~G~fg~V~~~~~~~--tg~~~AiK~i~k~~---~--------------~~------~----~~~----~~~------~ 41 (280)
T cd05608 1 LGKGGFGEVSACQMRA--TGKMYACKKLNKKR---L--------------KK------R----KGY----EGA------M 41 (280)
T ss_pred CCCCCCEEEEEEEECC--CCCEEEEEEEEHHH---C--------------CC------H----HHH----HHH------H
T ss_conf 9778574999999999--99799999980788---2--------------25------6----899----999------9
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHH-HHHH--HCCCHH---HHHHHHHHHHHHHH
Q ss_conf 9998898720244677664300001022178--33530024786324267-7332--002256---89999999999989
Q gi|254780623|r 207 LEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTE-KLRA--CGHDLE---RLSVTLVQSFLLHT 278 (517)
Q Consensus 207 ~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~-~l~~--~~~d~~---~la~~l~~~~~~qi 278 (517)
T Consensus 42 ~E~~il~~l~h-----~~--iv~l~~~~~~~~~~~lvmE~~~gG~L~~~i~~~~~~~~~~~e~~~~~~~~qi~~a-L~yl 113 (280)
T cd05608 42 VEKRILARVHS-----RF--IVSLAYAFQTKTDLCLVMTLMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIILG-LEHL 113 (280)
T ss_pred HHHHHHHHCCC-----CC--CCEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH-HHHH
T ss_conf 99999986699-----87--8859999987997899997268991899998755417998999999999999999-9999
Q ss_pred HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 744866178786228980289535743403121698
Q gi|254780623|r 279 LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 279 ~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 114 H~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 149 (280)
T cd05608 114 HQHRIVYRDLKPENVLLDNDGNVRISDLGLAVELKD 149 (280)
T ss_pred HHCCCEEEECCCCCEEECCCCCEEEECCCCCEEECC
T ss_conf 878926801473212146999889840464268327