HHsearch alignment for GI: 254780623 and conserved domain: cd05618

>cd05618 STKc_aPKC_iota STKc_aPKC_iota: Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been i
Probab=98.50  E-value=1.8e-07  Score=77.08  Aligned_cols=137  Identities=18%  Similarity=0.177  Sum_probs=81.2

Q ss_pred             HHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             67788886555502128887236876403104688777788999875321146854334691799999998878886559
Q gi|254780623|r  127 IAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDLR  206 (517)
Q Consensus       127 lasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~~  206 (517)
T Consensus         3 LG~G~fG~V~~~~~~~--t~~~~AiK~i~k~~~---~~~----------------------------~~~~~~~~E----   45 (329)
T cd05618           3 IGRGSYAKVLLVRLKK--TERIYAMKVVKKELV---NDD----------------------------EDIDWVQTE----   45 (329)
T ss_pred             EEECCCEEEEEEEECC--CCCEEEEEEECHHHC---CCH----------------------------HHHHHHHHH----
T ss_conf             4038793999999989--998999999867887---798----------------------------999999999----


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHC-CC---HHHHHHHHHHHHHHHHHH
Q ss_conf             9998898720244677664300001022178--33530024786324267733200-22---568999999999998974
Q gi|254780623|r  207 LEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACG-HD---LERLSVTLVQSFLLHTLR  280 (517)
Q Consensus       207 ~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~-~d---~~~la~~l~~~~~~qi~~  280 (517)
T Consensus        46 --~~il~~~~----~Hp~--Iv~l~~~f~~~~~lylVmEy~~GGdL~~~--l~~~~~l~e~~a~~~~~qi~~a-L~yLH~  114 (329)
T cd05618          46 --KHVFEQAS----NHPF--LVGLHSCFQTESRLFFVIEYVNGGDLMFH--MQRQRKLPEEHARFYSAEISLA-LNYLHE  114 (329)
T ss_pred             --HHHHHHHC----CCCC--CCEEEEEEEECCEEEEEEECCCCCCHHHH--HHHCCCCCHHHHHHHHHHHHHH-HHHHHC
T ss_conf             --99999713----9997--79599999989999999958898898999--9874999999999999999999-999863


Q ss_pred             CCEECCCCCCCEEEEECCCCEEEEECCHHEE
Q ss_conf             4866178786228980289535743403121
Q gi|254780623|r  281 DGFFHADLHPGNLFVDSKGYIVAVDMGITGR  311 (517)
Q Consensus       281 ~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~  311 (517)
T Consensus       115 ~~IiHRDLKPeNILld~~g~iKL~DFGlak~  145 (329)
T cd05618         115 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  145 (329)
T ss_pred             CCEEECCCCCCCCCCCCCCCEEECCCHHHHH
T ss_conf             9689644572100315688566314005555