HHsearch alignment for GI: 254780623 and conserved domain: cd05620
>cd05620 STKc_nPKC_delta STKc_nPKC_delta: Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhanc
Probab=98.58 E-value=2.4e-07 Score=76.11 Aligned_cols=137 Identities=20% Similarity=0.272 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 67788886555502128887236876403104688777788999875321146854334691799999998878886559
Q gi|254780623|r 127 IAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDLR 206 (517)
Q Consensus 127 lasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~~ 206 (517)
T Consensus 3 lG~G~fG~V~la~~~~--tg~~~AiK~i~k~~~----------------~---~~-----------~~~~-~~------~ 43 (316)
T cd05620 3 LGKGSFGKVLLAELKG--KGEYFAVKALKKDVV----------------L---ID-----------DDVE-CT------M 43 (316)
T ss_pred EEECCCEEEEEEEECC--CCCEEEEEEECHHHC----------------C---CC-----------HHHH-HH------H
T ss_conf 8528794999999999--998999999836662----------------4---60-----------5799-99------9
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCC--EEEEECCCCCCCCHHHHHHHHC-CCH---HHHHHHHHHHHHHHHHH
Q ss_conf 99988987202446776643000010221783--3530024786324267733200-225---68999999999998974
Q gi|254780623|r 207 LEAAAFSEMAENTVKDQGFRVPKIDWNRTERD--VITMEWIDGVKISDTEKLRACG-HDL---ERLSVTLVQSFLLHTLR 280 (517)
Q Consensus 207 ~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~--VLvmE~i~G~~i~d~~~l~~~~-~d~---~~la~~l~~~~~~qi~~ 280 (517)
T Consensus 44 ~e~~il~~~----~~hp~--Iv~l~~~f~~~~~lylvmEy~~gGdL~~~--l~~~~~~~e~~~~~~~~qi~~a-L~yLH~ 114 (316)
T cd05620 44 VEKRVLALA----WENPF--LTHLYCTFQTKEHLFFVMEFLNGGDLMFH--IQDKGRFDLYRATFYAAEIVCG-LQFLHS 114 (316)
T ss_pred HHHHHHHHH----CCCCC--EEEEEEEEEECCEEEEEEECCCCCCHHHH--HHHCCCCCHHHHHHHHHHHHHH-HHHHHH
T ss_conf 999999985----79996--82699999989999999976799888787--8744999999999999999999-999997
Q ss_pred CCEECCCCCCCEEEEECCCCEEEEECCHHEE
Q ss_conf 4866178786228980289535743403121
Q gi|254780623|r 281 DGFFHADLHPGNLFVDSKGYIVAVDMGITGR 311 (517)
Q Consensus 281 ~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~ 311 (517)
T Consensus 115 ~~IiHRDlKPeNILl~~~g~iKL~DFGlak~ 145 (316)
T cd05620 115 KGIIYRDLKLDNVMLDRDGHIKIADFGMCKE 145 (316)
T ss_pred CCCEECCCCCCCCCCCCCCCEEEEECCEEHH
T ss_conf 8905230376555505899789832140000