HHsearch alignment for GI: 254780623 and conserved domain: cd05621
>cd05621 STKc_ROCK2 STKc_ROCK2: Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain
Probab=98.54 E-value=1.9e-07 Score=76.89 Aligned_cols=142 Identities=13% Similarity=0.203 Sum_probs=89.5
Q ss_pred HHHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99867--6667788886555502128887236876403104688777788999875321146854334691799999998
Q gi|254780623|r 120 YCEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQ 197 (517)
Q Consensus 120 F~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 197 (517)
T Consensus 42 ~dDFeiik~IG~GsFG~V~lv~~k~--tg~~yAiK~i~K~~--~--------------~~~---------------~~~~ 88 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKS--SQKVYAMKLLSKFE--M--------------IKR---------------SDSA 88 (370)
T ss_pred HHHCEEEEEEEECCCCEEEEEEECC--CCCEEEEEEEEHHH--H--------------HHH---------------HHHH
T ss_conf 5400586688507684899999989--99899999998899--6--------------436---------------7899
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCC--EEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 87888655999988987202446776643000010221783--3530024786324267733200225689999999999
Q gi|254780623|r 198 VTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERD--VITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFL 275 (517)
Q Consensus 198 ~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~--VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~ 275 (517)
T Consensus 89 ~~~~------E~~il~~~-----~hp~--IV~l~~~Fqd~~~lylVmEy~~GGdL~~l--l~~~~~-----~E~~a~~y~ 148 (370)
T cd05621 89 FFWE------ERDIMAFA-----NSPW--VVQLFCAFQDDKYLYMVMEYMPGGDLVNL--MSNYDV-----PEKWAKFYT 148 (370)
T ss_pred HHHH------HHHHHHHC-----CCCC--CCCEEEEEEECCEEEEEEECCCCCCHHHH--HHCCCC-----CHHHHHHHH
T ss_conf 9999------99999857-----9998--89189999849989999858999749999--881898-----999999999
Q ss_pred HH-------HHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 98-------9744866178786228980289535743403121698
Q gi|254780623|r 276 LH-------TLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 276 ~q-------i~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 149 ~qi~~AL~yLH~~~IiHRDLKPeNILld~~g~iKL~DFGla~~~~~ 194 (370)
T cd05621 149 AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred HHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCEEECCCCEEEEECC
T ss_conf 9999999998538678566673221225888735324521578447