HHsearch alignment for GI: 254780623 and conserved domain: cd05621

>cd05621 STKc_ROCK2 STKc_ROCK2: Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain
Probab=98.54  E-value=1.9e-07  Score=76.89  Aligned_cols=142  Identities=13%  Similarity=0.203  Sum_probs=89.5

Q ss_pred             HHHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             99867--6667788886555502128887236876403104688777788999875321146854334691799999998
Q gi|254780623|r  120 YCEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQ  197 (517)
Q Consensus       120 F~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~  197 (517)
T Consensus        42 ~dDFeiik~IG~GsFG~V~lv~~k~--tg~~yAiK~i~K~~--~--------------~~~---------------~~~~   88 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKS--SQKVYAMKLLSKFE--M--------------IKR---------------SDSA   88 (370)
T ss_pred             HHHCEEEEEEEECCCCEEEEEEECC--CCCEEEEEEEEHHH--H--------------HHH---------------HHHH
T ss_conf             5400586688507684899999989--99899999998899--6--------------436---------------7899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCC--EEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             87888655999988987202446776643000010221783--3530024786324267733200225689999999999
Q gi|254780623|r  198 VTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERD--VITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFL  275 (517)
Q Consensus       198 ~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~--VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~  275 (517)
T Consensus        89 ~~~~------E~~il~~~-----~hp~--IV~l~~~Fqd~~~lylVmEy~~GGdL~~l--l~~~~~-----~E~~a~~y~  148 (370)
T cd05621          89 FFWE------ERDIMAFA-----NSPW--VVQLFCAFQDDKYLYMVMEYMPGGDLVNL--MSNYDV-----PEKWAKFYT  148 (370)
T ss_pred             HHHH------HHHHHHHC-----CCCC--CCCEEEEEEECCEEEEEEECCCCCCHHHH--HHCCCC-----CHHHHHHHH
T ss_conf             9999------99999857-----9998--89189999849989999858999749999--881898-----999999999


Q ss_pred             HH-------HHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf             98-------9744866178786228980289535743403121698
Q gi|254780623|r  276 LH-------TLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK  314 (517)
Q Consensus       276 ~q-------i~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~  314 (517)
T Consensus       149 ~qi~~AL~yLH~~~IiHRDLKPeNILld~~g~iKL~DFGla~~~~~  194 (370)
T cd05621         149 AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE  194 (370)
T ss_pred             HHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCEEECCCCEEEEECC
T ss_conf             9999999998538678566673221225888735324521578447