HHsearch alignment for GI: 254780623 and conserved domain: cd05633
>cd05633 STKc_GRK3 STKc_GRK3: Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory recept
Probab=98.74 E-value=3.2e-08 Score=82.87 Aligned_cols=143 Identities=16% Similarity=0.168 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 67788886555502128887236876403104688777788999875321146854334691799999998878886559
Q gi|254780623|r 127 IAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDLR 206 (517)
Q Consensus 127 lasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~~ 206 (517)
T Consensus 2 iG~G~fG~V~~~~~~~--tg~~~AiK~i~k~~---~~~----------------------------~~~~~~~~------ 42 (279)
T cd05633 2 IGRGGFGEVYGCRKAD--TGKMYAMKCLDKKR---IKM----------------------------KQGETLAL------ 42 (279)
T ss_pred CCCCCCEEEEEEEECC--CCCEEEEEEECHHH---HHH----------------------------HHHHHHHH------
T ss_conf 8208370999999889--99899999984788---014----------------------------67789999------
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHCC-CH---HHHHHHHHHHHHHHHHH
Q ss_conf 9998898720244677664300001022178--335300247863242677332002-25---68999999999998974
Q gi|254780623|r 207 LEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACGH-DL---ERLSVTLVQSFLLHTLR 280 (517)
Q Consensus 207 ~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~~-d~---~~la~~l~~~~~~qi~~ 280 (517)
T Consensus 43 ~e~~~~~~~~~--~~~p~iv--~~~~~~~~~~~~~lvmE~~~gg~L~~~--l~~~~~l~e~~~~~~~~qil~a-L~ylH~ 115 (279)
T cd05633 43 NERIMLSLVST--GDCPFIV--CMTYAFHTPDKLCFILDLMNGGDLHYH--LSQHGVFSEKEMRFYATEIILG-LEHMHN 115 (279)
T ss_pred HHHHHHHHHHC--CCCCCEE--EEEEEEEECCEEEEEEECCCCCCHHHH--HHHCCCCCHHHHHHHHHHHHHH-HHHHHH
T ss_conf 99999999852--7999787--899999989999999984599869999--9875999999999999999999-999987
Q ss_pred CCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf 48661787862289802895357434031216989
Q gi|254780623|r 281 DGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR 315 (517)
Q Consensus 281 ~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~ 315 (517)
T Consensus 116 ~~IiHRDlKP~NILl~~~g~~Kl~DFGla~~~~~~ 150 (279)
T cd05633 116 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 150 (279)
T ss_pred CCCEECCCCCCCCCCCCCCCEEECCCCEEEECCCC
T ss_conf 89874104733324036897696501055662688