HHsearch alignment for GI: 254780623 and conserved domain: cd06605

>cd06605 PKc_MAPKK Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residu
Probab=98.88  E-value=2.1e-08  Score=84.37  Aligned_cols=142  Identities=19%  Similarity=0.235  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r  125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD  204 (517)
Q Consensus       125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD  204 (517)
T Consensus         7 ~~iG~G~fg~Vy~a~~~~--~g~~vAvK~i~~~~~~~~---------------------------------~~~------   45 (265)
T cd06605           7 GELGAGNSGVVSKVRHRP--TGKIMAVKTIRLEINEAI---------------------------------QKQ------   45 (265)
T ss_pred             EEEECCCCEEEEEEEECC--CCCEEEEEEECHHCCHHH---------------------------------HHH------
T ss_conf             881118680999999989--998999999842059899---------------------------------999------


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCHHCCCHH--CCCCEEEEECCCCCCCCHHHHHHHHCCCHHH---HHHHHHHHHHHHHH
Q ss_conf             599998898720244677664300001022--1783353002478632426773320022568---99999999999897
Q gi|254780623|r  205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNR--TERDVITMEWIDGVKISDTEKLRACGHDLER---LSVTLVQSFLLHTL  279 (517)
Q Consensus       205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~--st~~VLvmE~i~G~~i~d~~~l~~~~~d~~~---la~~l~~~~~~qi~  279 (517)
T Consensus        46 ~~~Ei~~l~~l~-----HpnIv--~~~~~~~~~~~~~ivmEy~~~g~L~~~~~~~~~~~~e~~~~~i~~qi~~~l-~ylH  117 (265)
T cd06605          46 ILRELDILHKCN-----SPYIV--GFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGL-TYLH  117 (265)
T ss_pred             HHHHHHHHHHCC-----CCCCC--EEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH-HHHH
T ss_conf             999999998679-----98989--098999989988999926899869999987489999999999999999999-9998


Q ss_pred             H-CCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf             4-48661787862289802895357434031216989
Q gi|254780623|r  280 R-DGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR  315 (517)
Q Consensus       280 ~-~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~  315 (517)
T Consensus       118 ~~~~iiHRDiKp~NILl~~~g~iKl~DFG~s~~~~~~  154 (265)
T cd06605         118 EKHKIIHRDVKPSNILVNSRGEIKLCDFGVSGQLVNS  154 (265)
T ss_pred             HCCCEEEEEECCCCCCCCCCCCEEECCCCCCEECCCC
T ss_conf             7099873210565521889999898437342241578