HHsearch alignment for GI: 254780623 and conserved domain: cd06621
>cd06621 PKc_MAPKK_Pek1_like Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharo
Probab=98.80 E-value=1e-08 Score=86.68 Aligned_cols=143 Identities=17% Similarity=0.234 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 7 ~~lG~G~fg~V~~a~~~~--~~~~~AiK~i~~~--------------------~-~~------------~~~~~~----- 46 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKN--TGMIFALKTITTD--------------------P-NP------------DLQKQI----- 46 (287)
T ss_pred EEEECCCCEEEEEEEECC--CCEEEEEEEECCC--------------------C-CH------------HHHHHH-----
T ss_conf 573048890999999899--9919999998303--------------------5-95------------899999-----
Q ss_pred HHHHHHHHHHHHCCCCCCCC-CCCHHCCCHH-CCCCEEEEECCCCCCCCHHH-HHHHHCC-CHHH----HHHHHHHHHHH
Q ss_conf 59999889872024467766-4300001022-17833530024786324267-7332002-2568----99999999999
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQG-FRVPKIDWNR-TERDVITMEWIDGVKISDTE-KLRACGH-DLER----LSVTLVQSFLL 276 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~-v~vP~vy~~~-st~~VLvmE~i~G~~i~d~~-~l~~~~~-d~~~----la~~l~~~~~~ 276 (517)
T Consensus 47 -~~Ei~il~~l~-----HpnIv~~~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~~~~~~~e~~~~~i~~qil~g-L~ 119 (287)
T cd06621 47 -LRELEINKSCK-----SPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKG-LS 119 (287)
T ss_pred -HHHHHHHHHCC-----CCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH-HH
T ss_conf -99999998579-----999990978997088998999995469993999999998717999999999999999999-99
Q ss_pred HHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 89744866178786228980289535743403121698
Q gi|254780623|r 277 HTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 277 qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 120 ylH~~~iiHRDlKp~NILl~~~g~vKl~DFG~s~~~~~ 157 (287)
T cd06621 120 YLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred HHHHCCCEECCCCHHHEEECCCCCEEEEECCCCCCCCC
T ss_conf 99979904221674550067999899997855755577