HHsearch alignment for GI: 254780623 and conserved domain: cd06643

>cd06643 STKc_SLK Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.81  E-value=2.2e-08  Score=84.10  Aligned_cols=148  Identities=16%  Similarity=0.153  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf             99999986766677888865555021288872368764031046887777889998753211468543346917999999
Q gi|254780623|r  116 IEELYCEFDDPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRAL  195 (517)
Q Consensus       116 ~~~~F~~fdePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~  195 (517)
T Consensus         3 ~~d~Y~il-~~iG~G~fg~Vy~a~~~~--~~~~~AvK~~~~~~---------------------------------~~~~   46 (282)
T cd06643           3 PEEFWEII-GELGDGAFGKVYKAQNKE--TGVLAAAKVIDTKS---------------------------------EEEL   46 (282)
T ss_pred             HHHCEEEE-EEEECCCCEEEEEEEECC--CCCEEEEEEECCCC---------------------------------HHHH
T ss_conf             45887974-598027683999999889--99499999977248---------------------------------8999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHCCCH---HHHHHHH
Q ss_conf             988788865599998898720244677664300001022178--33530024786324267733200225---6899999
Q gi|254780623|r  196 EQVTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACGHDL---ERLSVTL  270 (517)
Q Consensus       196 ~~~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~~d~---~~la~~l  270 (517)
T Consensus        47 -------~~~~~Ei~il~~l~H-----pn--Iv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi  112 (282)
T cd06643          47 -------EDYMVEIDILASCDH-----PN--IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQT  112 (282)
T ss_pred             -------HHHHHHHHHHHHCCC-----CC--CCEEEEEEEECCEEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf             -------999999999986799-----89--9929999998998999999379994899998707999999999999999


Q ss_pred             HHHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf             99999989744866178786228980289535743403121698
Q gi|254780623|r  271 VQSFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK  314 (517)
Q Consensus       271 ~~~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~  314 (517)
T Consensus       113 ~~g-l~ylH~~~iiHRDIKp~NILl~~~g~vKl~DFGls~~~~~  155 (282)
T cd06643         113 LEA-LNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR  155 (282)
T ss_pred             HHH-HHHHHHCCEEEEECCHHHEEECCCCCEEEEECCCCEECCC
T ss_conf             999-9999978976633666877887999999960747730787