HHsearch alignment for GI: 254780623 and conserved domain: cd06655

>cd06655 STKc_PAK2 Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptoti
Probab=98.76  E-value=2.5e-08  Score=83.74  Aligned_cols=151  Identities=17%  Similarity=0.281  Sum_probs=95.0

Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf             04788999999867666778888655550212888723687640310468877778899987532114685433469179
Q gi|254780623|r  111 ALKAPIEELYCEFDDPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSA  190 (517)
Q Consensus       111 elg~~~~~~F~~fdePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~  190 (517)
T Consensus        13 s~gd~~~~-Y~~-~~~iG~G~fg~V~~a~~~~--t~~~vAiK~i~~--------------------~~-~~~--------   59 (296)
T cd06655          13 SIGDPKKK-YTR-YEKIGQGASGTVFTAIDVA--TGQEVAIKQINL--------------------QK-QPK--------   59 (296)
T ss_pred             CCCCCCCC-EEE-EEEECCCCCEEEEEEEECC--CCCEEEEEEEEC--------------------CC-CCH--------
T ss_conf             99995503-396-2798038680999999889--998999999862--------------------00-853--------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHC--CCCEEEEECCCCCCCCHHHHHHHHCCCHHH---
Q ss_conf             999999887888655999988987202446776643000010221--783353002478632426773320022568---
Q gi|254780623|r  191 VVRALEQVTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRT--ERDVITMEWIDGVKISDTEKLRACGHDLER---  265 (517)
Q Consensus       191 ~~~e~~~~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~s--t~~VLvmE~i~G~~i~d~~~l~~~~~d~~~---  265 (517)
T Consensus        60 --~~---~------~~~Ei~il~~l~H-----pn--Iv~l~~~~~~~~~~~ivmEy~~gg~L~~~i--~~~~l~e~~~~~  119 (296)
T cd06655          60 --KE---L------IINEILVMKELKN-----PN--IVNFLDSFLVGDELFVVMEYLAGGSLTDVV--TETCMDEAQIAA  119 (296)
T ss_pred             --HH---H------HHHHHHHHHHCCC-----CC--CCCEEEEEEECCEEEEEEECCCCCCHHHHH--HHCCCCHHHHHH
T ss_conf             --89---9------9999999996799-----89--991999999899999999658999289998--706999999999


Q ss_pred             HHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf             99999999999897448661787862289802895357434031216989
Q gi|254780623|r  266 LSVTLVQSFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR  315 (517)
Q Consensus       266 la~~l~~~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~  315 (517)
T Consensus       120 i~~qil~a-L~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  168 (296)
T cd06655         120 VCRECLQA-LEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE  168 (296)
T ss_pred             HHHHHHHH-HHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCC
T ss_conf             99999999-99999888744779768778889999999818887777788