>cd07843 STKc_CDC2L1 The catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 subfamily. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CD

Probab=98.61 E-value=1.4e-07 Score=77.81 Aligned_cols=141 Identities=14% Similarity=0.228 Sum_probs=84.3 Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865 Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517) Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517) T Consensus 11 ~~iG~G~fg~V~~~~~~~--t~~~vAiK~i~~~~~--------------------------------~~~~~~~~----- 51 (293) T cd07843 11 NRIEEGTYGVVYRARDKK--TGEIVALKKLKMEKE--------------------------------KEGFPITS----- 51 (293) T ss_pred EEEECCCCCEEEEEEECC--CCCEEEEEEEECHHH--------------------------------HHHHHHHH----- T ss_conf 783136280999999889--998999999800042--------------------------------20417889----- Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHC-CCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH----- Q ss_conf 5999988987202446776643000010221-7833530024786324267733200225689999999999989----- Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRT-ERDVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHT----- 278 (517) Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~s-t~~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi----- 278 (517) T Consensus 52 -~rEi~~l~~l~h----pnIv~~~~~~~~~~~~~~~lvmE~~~~-dl~~~--~~~~---~~~~~~~~i~~i~~qil~aL~ 120 (293) T cd07843 52 -LREINILLKLQH----PNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSL--METM---KQPFLQSEVKTLMLQLLSGVA 120 (293) T ss_pred -HHHHHHHHHCCC----CCEEEEEEEEECCCCCEEEEEEECCCC-CHHHH--HHHC---CCCCCHHHHHHHHHHHHHHHH T ss_conf -999999997689----994158887605889879999937888-78999--9974---899999999999999999999 Q ss_pred --HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH Q ss_conf --7448661787862289802895357434031216989 Q gi|254780623|r 279 --LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR 315 (517) Q Consensus 279 --~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~ 315 (517) T Consensus 121 yLH~~~IiHRDiKPeNILl~~~~~vKi~DFG~a~~~~~~ 159 (293) T cd07843 121 HLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293) T ss_pred HHHHCCEEEEECCHHHEEECCCCCEEEECCCCHHHCCCC T ss_conf 999889357256756657878998899224753342887

HHsearch alignment for GI: 254780623 and conserved domain: cd07843