HHsearch alignment for GI: 254780623 and conserved domain: cd07851
>cd07851 STKc_p38 The catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and
Probab=98.67 E-value=1.9e-07 Score=76.96 Aligned_cols=142 Identities=16% Similarity=0.209 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 21 ~~IG~G~fg~Vy~a~~~~--t~~~vAiK~i~~~~~~~--------------------------------~~~~~~----- 61 (343)
T cd07851 21 SPVGSGAYGQVCSAFDTK--TGRKVAIKKLSRPFQSA--------------------------------IHAKRT----- 61 (343)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEECHHHCCH--------------------------------HHHHHH-----
T ss_conf 698317294999999889--99899999988222497--------------------------------999999-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCC-----HHCCCCEEEEECCCCCCCCHHHHHHHHCCCH---HHHHHHHHHHHHH
Q ss_conf 5999988987202446776643000010-----2217833530024786324267733200225---6899999999999
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDW-----NRTERDVITMEWIDGVKISDTEKLRACGHDL---ERLSVTLVQSFLL 276 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~-----~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~---~~la~~l~~~~~~ 276 (517)
T Consensus 62 -~rEi~il~~l~H----pnIv~l~d~f~~~~~~~~~~~~yiv~e~~~-~~L~~~i--~~~~l~~~~i~~i~~qil~a-L~ 132 (343)
T cd07851 62 -YRELRLLKHMDH----ENVIGLLDVFTPASSLEDFQDVYLVTHLMG-ADLNNIV--KCQKLSDDHIQFLVYQILRG-LK 132 (343)
T ss_pred -HHHHHHHHHCCC----CCCCEEEEEEECCCCCCCCCEEEEEECCCC-CCHHHHH--HHCCCCHHHHHHHHHHHHHH-HH
T ss_conf -999999997579----995417888831776555765899974789-7899999--70899999999999999999-99
Q ss_pred HHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 89744866178786228980289535743403121698
Q gi|254780623|r 277 HTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 277 qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 133 ylH~~~IiHRDlKPeNILl~~~~~vKI~DFGlA~~~~~ 170 (343)
T cd07851 133 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD 170 (343)
T ss_pred HHHHCCCEECCCCHHHEEECCCCCEEECCCCCCEECCC
T ss_conf 99878763376863655886889788714767623477