HHsearch alignment for GI: 254780623 and conserved domain: cd07853
>cd07853 STKc_NLK The catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase subfamily. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate
Probab=98.54 E-value=2.5e-07 Score=75.98 Aligned_cols=143 Identities=20% Similarity=0.249 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 6 r~IG~G~fG~Vy~a~d~~--tg~~VAiKki~~-~~----~~~~---------------------------~~~~~----- 46 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPR--DGKRVALKKMPN-VF----QNLV---------------------------SCKRV----- 46 (372)
T ss_pred EECCCCCCEEEEEEEECC--CCCEEEEEEECC-CC----CCHH---------------------------HHHHH-----
T ss_conf 463037683999999789--998999999893-00----3868---------------------------89999-----
Q ss_pred HHHHHHHHHHHHC-CCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH-----
Q ss_conf 5999988987202-4467766430000102217833530024786324267733200225689999999999989-----
Q gi|254780623|r 205 LRLEAAAFSEMAE-NTVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHT----- 278 (517)
Q Consensus 205 ~~~Ea~n~~~~~~-~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi----- 278 (517)
T Consensus 47 -~rEi~iL~~l~H~NIv~~~~v~~~~~-~~~~~~iyiv~el~~~d-L~~~--i~~~----~~l~~~~i~~i~~Qil~aL~ 117 (372)
T cd07853 47 -FRELKMLCFFKHDNVLSALDILQPPH-IDPFEEIYVVTELMQSD-LHKI--IVSP----QPLSSDHVKVFLYQILRGLK 117 (372)
T ss_pred -HHHHHHHHHCCCCCCCCEEEEEECCC-CCCCEEEEEEEECCCCC-HHHH--HHHC----CCCCHHHHHHHHHHHHHHHH
T ss_conf -99999998679989891899995178-77622799998158975-8999--9746----99999999999999999999
Q ss_pred --HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf --7448661787862289802895357434031216989
Q gi|254780623|r 279 --LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR 315 (517)
Q Consensus 279 --~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~ 315 (517)
T Consensus 118 ylHs~~IiHRDLKP~NILl~~~~~lKI~DFGlAr~~~~~ 156 (372)
T cd07853 118 YLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred HHHHCCCEECCCCHHHEEECCCCCEEEEECCCCEECCCC
T ss_conf 997599152778779868878998897222555322688