HHsearch alignment for GI: 254780623 and conserved domain: cd07853

>cd07853 STKc_NLK The catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase subfamily. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate
Probab=98.54  E-value=2.5e-07  Score=75.98  Aligned_cols=143  Identities=20%  Similarity=0.249  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r  125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD  204 (517)
Q Consensus       125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD  204 (517)
T Consensus         6 r~IG~G~fG~Vy~a~d~~--tg~~VAiKki~~-~~----~~~~---------------------------~~~~~-----   46 (372)
T cd07853           6 RPIGYGAFGVVWSVTDPR--DGKRVALKKMPN-VF----QNLV---------------------------SCKRV-----   46 (372)
T ss_pred             EECCCCCCEEEEEEEECC--CCCEEEEEEECC-CC----CCHH---------------------------HHHHH-----
T ss_conf             463037683999999789--998999999893-00----3868---------------------------89999-----


Q ss_pred             HHHHHHHHHHHHC-CCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH-----
Q ss_conf             5999988987202-4467766430000102217833530024786324267733200225689999999999989-----
Q gi|254780623|r  205 LRLEAAAFSEMAE-NTVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHT-----  278 (517)
Q Consensus       205 ~~~Ea~n~~~~~~-~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi-----  278 (517)
T Consensus        47 -~rEi~iL~~l~H~NIv~~~~v~~~~~-~~~~~~iyiv~el~~~d-L~~~--i~~~----~~l~~~~i~~i~~Qil~aL~  117 (372)
T cd07853          47 -FRELKMLCFFKHDNVLSALDILQPPH-IDPFEEIYVVTELMQSD-LHKI--IVSP----QPLSSDHVKVFLYQILRGLK  117 (372)
T ss_pred             -HHHHHHHHHCCCCCCCCEEEEEECCC-CCCCEEEEEEEECCCCC-HHHH--HHHC----CCCCHHHHHHHHHHHHHHHH
T ss_conf             -99999998679989891899995178-77622799998158975-8999--9746----99999999999999999999


Q ss_pred             --HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf             --7448661787862289802895357434031216989
Q gi|254780623|r  279 --LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR  315 (517)
Q Consensus       279 --~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~  315 (517)
T Consensus       118 ylHs~~IiHRDLKP~NILl~~~~~lKI~DFGlAr~~~~~  156 (372)
T cd07853         118 YLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD  156 (372)
T ss_pred             HHHHCCCEECCCCHHHEEECCCCCEEEEECCCCEECCCC
T ss_conf             997599152778779868878998897222555322688