HHsearch alignment for GI: 254780623 and conserved domain: cd07862
>cd07862 STKc_CDK6 The catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cyt
Probab=98.38 E-value=2.3e-06 Score=68.52 Aligned_cols=145 Identities=23% Similarity=0.266 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 7 ~~iG~G~fg~V~~~~~~-~~~~~~vAiK~i~~~~~~~--------------------------------~~~~~~----- 48 (290)
T cd07862 7 AEIGEGAYGKVFKARDL-KNGGRFVALKRVRVQTGEE--------------------------------GMPLST----- 48 (290)
T ss_pred EEEECCCCCEEEEEEEE-CCCCEEEEEEEECCCCCCH--------------------------------HHHHHH-----
T ss_conf 58641438099999998-9899899999984000330--------------------------------448999-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCC-------HHCCCCEEEEECCCCCCCCH-HHHHHHHCCCHH---HHHHHHHHH
Q ss_conf 5999988987202446776643000010-------22178335300247863242-677332002256---899999999
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDW-------NRTERDVITMEWIDGVKISD-TEKLRACGHDLE---RLSVTLVQS 273 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~-------~~st~~VLvmE~i~G~~i~d-~~~l~~~~~d~~---~la~~l~~~ 273 (517)
T Consensus 49 -~~Ei~il~~l~~-~-~HpnIv--~l~d~~~~~~~~~~~~~~iv~E~~~~~-L~~~l~~~~~~~~~~~~i~~i~~Qil~a 122 (290)
T cd07862 49 -IREVAVLRHLET-F-EHPNVV--RLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRG 122 (290)
T ss_pred -HHHHHHHHHHHH-C-CCCCEE--EEEEEEEECCCCCCCEEEEEEECCCCC-HHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf -999999997615-6-899988--898788522457887699999779998-8999986667898999999999999999
Q ss_pred HHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 99989744866178786228980289535743403121698
Q gi|254780623|r 274 FLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 274 ~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 123 -l~ylH~~~IiHRDlKPeNILl~~~~~vKl~DFGla~~~~~ 162 (290)
T cd07862 123 -LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 162 (290)
T ss_pred -HHHHHHCCCEECCCCHHHEEECCCCCEEECCCCCCEECCC
T ss_conf -9999988934354645235898999979732343055367