HHsearch alignment for GI: 254780623 and conserved domain: cd07866
>cd07866 STKc_BUR1 The catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 subfamily. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen
Probab=98.52 E-value=2.4e-07 Score=76.11 Aligned_cols=140 Identities=14% Similarity=0.202 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 14 ~~iG~G~fg~V~~a~~~~--t~~~vAiK~i~~~~~---------------------~--------~---~~~~~~----- 54 (311)
T cd07866 14 GKLGEGTFGEVYKARQIK--TGRVVALKKILMHNE---------------------K--------D---GFPITA----- 54 (311)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEEECCCC---------------------C--------H---HHHHHH-----
T ss_conf 698417090999999999--998999999860113---------------------3--------1---668999-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCC-------HHCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 5999988987202446776643000010-------221783353002478632426773320022568999999999998
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDW-------NRTERDVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLH 277 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~-------~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~q 277 (517)
T Consensus 55 -~~Ei~il~~l~H--~--nIi~~~~~~~~~~~~~~~~~~~~~~v~ey~~~dl~~---~l~~~~~---~l~~~~~~~i~~q 123 (311)
T cd07866 55 -LREIKILKKLKH--P--NVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSG---LLENPSV---KLTESQIKCYMLQ 123 (311)
T ss_pred -HHHHHHHHHCCC--C--CCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCHHH---HHHHCCC---CCCHHHHHHHHHH
T ss_conf -999999997279--9--822035799973665445476699998156876788---9985478---9999999999999
Q ss_pred H-------HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 9-------744866178786228980289535743403121698
Q gi|254780623|r 278 T-------LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 278 i-------~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 124 ll~al~ylH~~~IiHRDlKPeNILl~~~~~~Kl~DFG~a~~~~~ 167 (311)
T cd07866 124 LLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDG 167 (311)
T ss_pred HHHHHHHHHHCCCEECCCCHHHEEECCCCCEEECCCCCCEECCC
T ss_conf 99999999978960111768995688999889855898737466