HHsearch alignment for GI: 254780623 and conserved domain: cd07878
>cd07878 STKc_p38beta_MAPK11 The catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11,
Probab=98.60 E-value=5.8e-08 Score=80.90 Aligned_cols=157 Identities=16% Similarity=0.205 Sum_probs=89.5
Q ss_pred HHCCCCHHHHHHHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 404788999999867--666778888655550212888723687640310468877778899987532114685433469
Q gi|254780623|r 110 SALKAPIEELYCEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLC 187 (517)
Q Consensus 110 ~elg~~~~~~F~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~ 187 (517)
T Consensus 4 ~~~~~~~w~i~erY~~~~~IG~G~fG~Vy~a~d~--~t~~~vAiK~i~~~~~~~~~~----------------------- 58 (343)
T cd07878 4 QELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDT--RLRQKVAVKKLSRPFQSLIHA----------------------- 58 (343)
T ss_pred EECCCEEECCCCCEEEEEEEECCCCEEEEEEEEC--CCCCEEEEEEECCCHHHHHHH-----------------------
T ss_conf 9758705667547287369731608499999989--999899999988201235889-----------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCC-----HHCCCCEEEEECCCCCCCCHHHHHHHHCCC
Q ss_conf 179999999887888655999988987202446776643000010-----221783353002478632426773320022
Q gi|254780623|r 188 FSAVVRALEQVTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDW-----NRTERDVITMEWIDGVKISDTEKLRACGHD 262 (517)
Q Consensus 188 ~~~~~~e~~~~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~-----~~st~~VLvmE~i~G~~i~d~~~l~~~~~d 262 (517)
T Consensus 59 ---------~------~~~rEi~il~~l~H----~nIv~l~~~f~~~~~~~~~~~~~lv~e~~-g~~L~~~~--k~~~l~ 116 (343)
T cd07878 59 ---------R------RTYRELRLLKHMKH----ENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIV--KCQKLS 116 (343)
T ss_pred ---------H------HHHHHHHHHHHCCC----CCCCEEEEEECCCCCCCCCCEEEEEEECC-CCCHHHHH--HCCCCC
T ss_conf ---------9------99999999986689----89411788851466555587699998058-96799998--629999
Q ss_pred H---HHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 5---689999999999989744866178786228980289535743403121698
Q gi|254780623|r 263 L---ERLSVTLVQSFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 263 ~---~~la~~l~~~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 117 e~~i~~i~~Qil~a-L~ylHs~~IIHRDLKP~NILl~~~~~vKL~DFGlA~~~~~ 170 (343)
T cd07878 117 DEHVQFLIYQLLRG-LKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD 170 (343)
T ss_pred HHHHHHHHHHHHHH-HHHHHHCCCEECCCCHHHEEECCCCCEEEEECCCCEECCC
T ss_conf 99999999999999-9999888855466872554686778779841446611588