HHsearch alignment for GI: 254780624 and conserved domain: COG0286
>COG0286 HsdM Type I restriction-modification system methyltransferase subunit [Defense mechanisms].
Probab=96.89 E-value=0.0017 Score=42.66 Aligned_cols=117 Identities=21% Similarity=0.284 Sum_probs=74.4
Q ss_pred HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCC---CCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
Q ss_conf 9998520644679977986023355777776641388---6327872133222211110000011222222222223334
Q gi|254780624|r 58 EAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDN---RSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETL 134 (265)
Q Consensus 58 ~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~---~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~l 134 (265)
T Consensus 176 ~liv~~l~~~~~~--~i~DpacGsgg~l~~a~~~~~~~~~~~~~yGqE~~~~t~~l~~mN~~lhgi~~~~~i~~~dtl~~ 253 (489)
T COG0286 176 ELIVELLDPEPRN--SIYDPACGSGGMLLQAAKYLKRHQDEIFIYGQEINDTTYRLAKMNLILHGIEGDANIRHGDTLSN 253 (489)
T ss_pred HHHHHHCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 9999975776565--23473354037999999999751555049989566889999996116627874223433442368
Q ss_pred CCC-----CCCCCCCEEE--EE------EC--C-----------CH----HHHHHHCCCCHHCCCCCEEEEE
Q ss_conf 575-----5446740366--42------01--3-----------21----3443201210004852117763
Q gi|254780624|r 135 PFE-----ANSFDACTLA--FG------IR--N-----------MP----HITLVLQEIYRILKCGGRLLVL 176 (265)
Q Consensus 135 p~~-----d~sfD~V~~s--f~------l~--~-----------~~----d~~~~l~e~~RvLKpGG~~~i~ 176 (265)
T Consensus 254 ~~~~~~~~~~~~D~viaNPPf~~~~w~~~~~~~~~~~~~~~~g~~~~~~~~d~afi~h~~~~l~~~g~aaiv 325 (489)
T COG0286 254 PKHDDKDDKGKFDFVIANPPFSGKGWGGDLLESEQDERFFFYGVFPTKNSADLAFLQHILYKLKPGGRAAIV 325 (489)
T ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 733234665550168657995544434433100243200025778889527899999999971867705899