HHsearch alignment for GI: 254780624 and conserved domain: COG0742
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair].
Probab=98.09 E-value=5.5e-06 Score=58.72 Aligned_cols=116 Identities=19% Similarity=0.305 Sum_probs=85.7
Q ss_pred HHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC--
Q ss_conf 999985206446799779860233557777766413886327872133222211110000011222222222223334--
Q gi|254780624|r 57 KEAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETL-- 134 (265)
Q Consensus 57 r~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~l-- 134 (265)
T Consensus 30 REalFNil~~~~i~g~~~LDlFAGSGaLGlEAlSRGA--~~~~~vE~~~~a~~~l~~N~~~l~~~~~~~~~~~da~~~L~ 107 (187)
T COG0742 30 REALFNILAPDEIEGARVLDLFAGSGALGLEALSRGA--ARVVFVEKDRKAVKILKENLKALGLEGEARVLRNDALRALK 107 (187)
T ss_pred HHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHH
T ss_conf 8999987343445798899946876476899985788--56999965989999999999984876125998400899987
Q ss_pred CCCCC-CCCCCEE--EEEECCCHHHHHHHCC--CCHHCCCCCEEEE
Q ss_conf 57554-4674036--6420132134432012--1000485211776
Q gi|254780624|r 135 PFEAN-SFDACTL--AFGIRNMPHITLVLQE--IYRILKCGGRLLV 175 (265)
Q Consensus 135 p~~d~-sfD~V~~--sf~l~~~~d~~~~l~e--~~RvLKpGG~~~i 175 (265)
T Consensus 108 ~~~~~~~FDlVflDPPy~-~~l~~~~~~~~~~~~~~~L~~~~~iv~ 152 (187)
T COG0742 108 QLGTREPFDLVFLDPPYA-KGLLDKELALLLLEENGWLKPGALIVV 152 (187)
T ss_pred HCCCCCCCCEEEECCCCC-CCHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 227788512899689975-360668999988876587788968999