HHsearch alignment for GI: 254780624 and conserved domain: COG1889

Probab=96.21  E-value=0.0085  Score=38.20  Aligned_cols=115  Identities=15%  Similarity=0.209  Sum_probs=73.8

Q ss_pred             HHHH---HHHHHHHH----C-CCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCC
Q ss_conf             1799---99998520----6-44679977986023355777776641388632787213322221111000001122222
Q gi|254780624|r   53 HRFW---KEAMVTNL----N-PRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCI  124 (265)
Q Consensus        53 ~r~W---r~~~i~~l----~-~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i  124 (265)
T Consensus        51 YR~Wnp~RSKLaAaIl~Gl~~~pi~~g~~VLYLGAasGTTvSHVSDIv~-~G~iYaVEfs~R~~reLl~~a~~---R~Ni  126 (231)
T COG1889          51 YREWNPRRSKLAAAILKGLKNFPIKEGSKVLYLGAASGTTVSHVSDIVG-EGRIYAVEFSPRPMRELLDVAEK---RPNI  126 (231)
T ss_pred             EEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC-CCCEEEEEECCHHHHHHHHHHHH---CCCC
T ss_conf             5656765137799997370027769998789950367985767776047-87089999644469999999874---7874


Q ss_pred             CCCCCCCCCCC-C--CCCCCCCCEEEEEECCCHHH---HHHHCCCCHHCCCCCEEEEE
Q ss_conf             22222233345-7--55446740366420132134---43201210004852117763
Q gi|254780624|r  125 TFIEANAETLP-F--EANSFDACTLAFGIRNMPHI---TLVLQEIYRILKCGGRLLVL  176 (265)
Q Consensus       125 ~~~~~da~~lp-~--~d~sfD~V~~sf~l~~~~d~---~~~l~e~~RvLKpGG~~~i~  176 (265)
T Consensus       127 ~PIL~DA~~P~~Y~~~Ve~VDviy~-----DVAQp~Qa~I~~~Na~~FLk~~G~~~i~  179 (231)
T COG1889         127 IPILEDARKPEKYRHLVEKVDVIYQ-----DVAQPNQAEILADNAEFFLKKGGYVVIA  179 (231)
T ss_pred             EEEECCCCCCHHHHHHCCCCCEEEE-----ECCCCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             0020136883776531245438998-----3688107899998899732169739999