HHsearch alignment for GI: 254780624 and conserved domain: COG2519
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis].
Probab=99.37 E-value=1.4e-12 Score=101.33 Aligned_cols=108 Identities=24% Similarity=0.322 Sum_probs=94.9
Q ss_pred HHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98520644679977986023355777776641388632787213322221111000001122222222222333457554
Q gi|254780624|r 60 MVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFEAN 139 (265)
Q Consensus 60 ~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~d~ 139 (265)
T Consensus 86 I~~~~gi~--pg~rVlEAGtGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~- 162 (256)
T COG2519 86 IVARLGIS--PGSRVLEAGTGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEE- 162 (256)
T ss_pred HHHHCCCC--CCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC-
T ss_conf 99870999--887899815680599999999648884599999527899999999998424561378705400024655-
Q ss_pred CCCCCEEEEEECCCHHHHHHHCCCCHHCCCCCEEEE
Q ss_conf 467403664201321344320121000485211776
Q gi|254780624|r 140 SFDACTLAFGIRNMPHITLVLQEIYRILKCGGRLLV 175 (265)
Q Consensus 140 sfD~V~~sf~l~~~~d~~~~l~e~~RvLKpGG~~~i 175 (265)
T Consensus 163 ~vDav~L-----Dmp~PW~~le~~~~~Lkpgg~~~~ 193 (256)
T COG2519 163 DVDAVFL-----DLPDPWNVLEHVSDALKPGGVVVV 193 (256)
T ss_pred CCCEEEE-----CCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 4677997-----589848999999987179967999