HHsearch alignment for GI: 254780624 and conserved domain: COG2813

>COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis].
Probab=98.99  E-value=6.3e-10  Score=84.13  Aligned_cols=113  Identities=20%  Similarity=0.323  Sum_probs=83.2

Q ss_pred             HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99985206446799779860233557777766413886327872133222211110000011222222222223334575
Q gi|254780624|r   58 EAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFE  137 (265)
Q Consensus        58 ~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~  137 (265)
T Consensus       148 ~lLl~~l~~~~~~--~vlDlGCG~Gvlg~~la~~~p-~~~vtmvDvn~~Av~~ar~Nl~~N~~~-~~~v~~s~~-~~~v~  222 (300)
T COG2813         148 RLLLETLPPDLGG--KVLDLGCGYGVLGLVLAKKSP-QAKLTLVDVNARAVESARKNLAANGVE-NTEVWASNL-YEPVE  222 (300)
T ss_pred             HHHHHHCCCCCCC--CEEEECCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHCCCC-CCEEEEECC-CCCCC
T ss_conf             9999737755699--688707884299999998689-872899826699999988769973987-637998124-46654


Q ss_pred             CCCCCCCEEEEEECC---CH-H-HHHHHCCCCHHCCCCCEEEEE
Q ss_conf             544674036642013---21-3-443201210004852117763
Q gi|254780624|r  138 ANSFDACTLAFGIRN---MP-H-ITLVLQEIYRILKCGGRLLVL  176 (265)
Q Consensus       138 d~sfD~V~~sf~l~~---~~-d-~~~~l~e~~RvLKpGG~~~i~  176 (265)
T Consensus       223 ~-kfd~IisNPPfh~G~~v~~~~~~~ii~~A~~~L~~gGeL~iV  265 (300)
T COG2813         223 G-KFDLIISNPPFHAGKAVVHSLAQEIIAAAARHLKPGGELWIV  265 (300)
T ss_pred             C-CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             4-006898488846771016788999999999760459779999