HHsearch alignment for GI: 254780624 and conserved domain: COG2813
>COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis].
Probab=98.99 E-value=6.3e-10 Score=84.13 Aligned_cols=113 Identities=20% Similarity=0.323 Sum_probs=83.2
Q ss_pred HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99985206446799779860233557777766413886327872133222211110000011222222222223334575
Q gi|254780624|r 58 EAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFE 137 (265)
Q Consensus 58 ~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~ 137 (265)
T Consensus 148 ~lLl~~l~~~~~~--~vlDlGCG~Gvlg~~la~~~p-~~~vtmvDvn~~Av~~ar~Nl~~N~~~-~~~v~~s~~-~~~v~ 222 (300)
T COG2813 148 RLLLETLPPDLGG--KVLDLGCGYGVLGLVLAKKSP-QAKLTLVDVNARAVESARKNLAANGVE-NTEVWASNL-YEPVE 222 (300)
T ss_pred HHHHHHCCCCCCC--CEEEECCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHCCCC-CCEEEEECC-CCCCC
T ss_conf 9999737755699--688707884299999998689-872899826699999988769973987-637998124-46654
Q ss_pred CCCCCCCEEEEEECC---CH-H-HHHHHCCCCHHCCCCCEEEEE
Q ss_conf 544674036642013---21-3-443201210004852117763
Q gi|254780624|r 138 ANSFDACTLAFGIRN---MP-H-ITLVLQEIYRILKCGGRLLVL 176 (265)
Q Consensus 138 d~sfD~V~~sf~l~~---~~-d-~~~~l~e~~RvLKpGG~~~i~ 176 (265)
T Consensus 223 ~-kfd~IisNPPfh~G~~v~~~~~~~ii~~A~~~L~~gGeL~iV 265 (300)
T COG2813 223 G-KFDLIISNPPFHAGKAVVHSLAQEIIAAAARHLKPGGELWIV 265 (300)
T ss_pred C-CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 4-006898488846771016788999999999760459779999