HHsearch alignment for GI: 254780624 and conserved domain: COG3963

Probab=98.36  E-value=6.7e-07  Score=64.63  Aligned_cols=114  Identities=18%  Similarity=0.311  Sum_probs=89.7

Q ss_pred             HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC--
Q ss_conf             999852064467997798602335577777664138863278721332222111100000112222222222233345--
Q gi|254780624|r   58 EAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLP--  135 (265)
Q Consensus        58 ~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp--  135 (265)
T Consensus        38 ~~M~s~I~pesg--lpVlElGPGTGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~------~p~~~ii~gda~~l~~~  109 (194)
T COG3963          38 RKMASVIDPESG--LPVLELGPGTGVITKAILSRGVRPESLTAIEYSPDFVCHLNQL------YPGVNIINGDAFDLRTT  109 (194)
T ss_pred             HHHHHCCCCCCC--CEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHH------CCCCCCCCCCHHHHHHH
T ss_conf             999843484459--7647776986676899996579954368998277999999975------88751305405657877


Q ss_pred             ---CCCCCCCCCEEEEEECCCHH--HHHHHCCCCHHCCCCCEEEEEECC
Q ss_conf             ---75544674036642013213--443201210004852117763055
Q gi|254780624|r  136 ---FEANSFDACTLAFGIRNMPH--ITLVLQEIYRILKCGGRLLVLEFS  179 (265)
Q Consensus       136 ---~~d~sfD~V~~sf~l~~~~d--~~~~l~e~~RvLKpGG~~~i~df~  179 (265)
T Consensus       110 l~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftYg  158 (194)
T COG3963         110 LGEHKGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTYG  158 (194)
T ss_pred             HHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf             8652797401688656002486778999999999856899727999846