HHsearch alignment for GI: 254780624 and conserved domain: COG4262

>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only].
Probab=97.27  E-value=0.00033  Score=47.25  Aligned_cols=107  Identities=21%  Similarity=0.300  Sum_probs=74.0

Q ss_pred             CCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC----CHHCCC--CCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf             9779860233557777766413886327872133222211110----000011--22222222222333-4575544674
Q gi|254780624|r   71 DYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRD----RAFKEN--LQDCITFIEANAET-LPFEANSFDA  143 (265)
Q Consensus        71 ~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~----r~~~~~--~~~~i~~~~~da~~-lp~~d~sfD~  143 (265)
T Consensus       290 a~~vLvlGGGDGLAlRellk-yP~~~qI~lVdLDP~miela~~~~vlr~~N~~sf~dpRv~Vv~dDAf~wlr~a~~~fD~  368 (508)
T COG4262         290 ARSVLVLGGGDGLALRELLK-YPQVEQITLVDLDPRMIELASHATVLRALNQGSFSDPRVTVVNDDAFQWLRTAADMFDV  368 (508)
T ss_pred             CCEEEEECCCCHHHHHHHHH-CCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCCE
T ss_conf             42699972875187999971-88855278974388999873002676660367766875699965478899741345557


Q ss_pred             CEEEEEECCCHHHH----------HHHCCCCHHCCCCCEEEEEE---CCCCCC
Q ss_conf             03664201321344----------32012100048521177630---554455
Q gi|254780624|r  144 CTLAFGIRNMPHIT----------LVLQEIYRILKCGGRLLVLE---FSEVQG  183 (265)
Q Consensus       144 V~~sf~l~~~~d~~----------~~l~e~~RvLKpGG~~~i~d---f~~p~~  183 (265)
T Consensus       369 vIVD-----l~DP~tps~~rlYS~eFY~ll~~~l~e~Gl~VvQags~y~tp~v  416 (508)
T COG4262         369 VIVD-----LPDPSTPSIGRLYSVEFYRLLSRHLAETGLMVVQAGSPYFTPRV  416 (508)
T ss_pred             EEEE-----CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCE
T ss_conf             9996-----89989951343210899999997337575499954887657730