HHsearch alignment for GI: 254780624 and conserved domain: KOG2352

Probab=97.72  E-value=5.4e-05  Score=52.35  Aligned_cols=114  Identities=20%  Similarity=0.382  Sum_probs=79.8

Q ss_pred             HHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99852064467997798602335577777664138863278721332222111100000112222222222233345755
Q gi|254780624|r   59 AMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFEA  138 (265)
Q Consensus        59 ~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~d  138 (265)
T Consensus        40 ~i~~~~~p~~---~~~l~lGCGNS~l~e~ly~~G~--~dI~~iD~S~V~V~~m~~~~~~~--~~~~~~~~~d~~~l~fed  112 (482)
T KOG2352          40 SIMKYLSPSD---FKILQLGCGNSELSEHLYKNGF--EDITNIDSSSVVVAAMQVRNAKE--RPEMQMVEMDMDQLVFED  112 (482)
T ss_pred             HHHHHHCHHH---CEEEEECCCCCHHHHHHHHCCC--CCCEECCCCHHHHHHHHHCCCCC--CCCEEEEEECCHHCCCCC
T ss_conf             8887506545---1147615887799999986587--77422005689999987514567--742488980211035787


Q ss_pred             CCCCCCEEEEEECC----------CHHHHHHHCCCCHHCCCCCEEEEEECC
Q ss_conf             44674036642013----------213443201210004852117763055
Q gi|254780624|r  139 NSFDACTLAFGIRN----------MPHITLVLQEIYRILKCGGRLLVLEFS  179 (265)
Q Consensus       139 ~sfD~V~~sf~l~~----------~~d~~~~l~e~~RvLKpGG~~~i~df~  179 (265)
T Consensus       113 ESFdiVIdkGtlDal~~de~a~~~~~~v~~~~~eVsrvl~~~gk~~svtl~  163 (482)
T KOG2352         113 ESFDIVIDKGTLDALFEDEDALLNTAHVSNMLDEVSRVLAPGGKYISVTLV  163 (482)
T ss_pred             CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf             531488732764001478500234677667776678874269878999861