HHsearch alignment for GI: 254780624 and conserved domain: PRK08317

Probab=100.00  E-value=4.6e-33  Score=233.17  Aligned_cols=168  Identities=26%  Similarity=0.432  Sum_probs=135.9

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
Q ss_conf             79999998520644679977986023355777776641388632787213322221111000001122222222222333
Q gi|254780624|r   54 RFWKEAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAET  133 (265)
Q Consensus        54 r~Wr~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~  133 (265)
T Consensus         5 ~~~r~~~l~~L~l~pG~--~vLDiGcG~G~~~~~la~~~g~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~   80 (241)
T PRK08317          5 RRYRARTFELLAVQPGE--RVLDVGCGPGNDLRELADRVGPEGRVVGIDRSEAMLALARERAAGLL--SNVEFVRGDADG   80 (241)
T ss_pred             HHHHHHHHHHCCCCCCC--EEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCC--CCEEEEECCHHH
T ss_conf             89999999736999979--99996641749999999974999789999698899999999986228--964999554643


Q ss_pred             CCCCCCCCCCCEEEEEECCCHHHHHHHCCCCHHCCCCCEEEEEECCC------CCC-CHHHHHHHHHHHCHHHHHHHHHC
Q ss_conf             45755446740366420132134432012100048521177630554------455-10112345653111332102542
Q gi|254780624|r  134 LPFEANSFDACTLAFGIRNMPHITLVLQEIYRILKCGGRLLVLEFSE------VQG-PVFKKIYDMWSFKVIPQLGRFIA  206 (265)
Q Consensus       134 lp~~d~sfD~V~~sf~l~~~~d~~~~l~e~~RvLKpGG~~~i~df~~------p~~-~~~~~~~~~y~~~iiP~~g~~~~  206 (265)
T Consensus        81 lp~~d~sfD~v~~~~~l~h~~d~~~~l~e~~RvLkPGG~~vi~d~Dw~~~~~~~~~~~~~~~i~~~~~~~~---------  151 (241)
T PRK08317         81 LPFPDESFDAVRSDRVLQHLEDPRRALAEMARVLRPGGRAVVLDTDWDTLVIHSGDRALMRKILNFWSDHF---------  151 (241)
T ss_pred             CCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC---------
T ss_conf             58988870456221157622589999999999818883899996678867428988899999999999747---------


Q ss_pred             CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             88768657899999689989999999975995379998556
Q gi|254780624|r  207 GDEEPYQYLIESIRRFPNQQDFAAVISAAGFSNVSFTNYTN  247 (265)
Q Consensus       207 ~~~~~Y~yL~~Si~~f~~~~el~~~l~~aGF~~v~~~~~~~  247 (265)
T Consensus       152 ~~--~-----------~~gr~L~~~l~~aG~~~v~~~~~~~  179 (241)
T PRK08317        152 AN--P-----------WLGRRLPGLFREAGLTDIEVEPYTL  179 (241)
T ss_pred             CC--C-----------HHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf             89--2-----------0789999999986990568888778