HHsearch alignment for GI: 254780624 and conserved domain: PRK08507
>PRK08507 prephenate dehydrogenase; Validated.
Probab=94.60 E-value=0.078 Score=31.99 Aligned_cols=150 Identities=19% Similarity=0.244 Sum_probs=77.8
Q ss_pred CEEEECCHH--HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 779860233--557777766413886327872133222211110000011222222222223334575544674036642
Q gi|254780624|r 72 YRVLDVAGG--TGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFEANSFDACTLAFG 149 (265)
Q Consensus 72 ~~iLDiGcG--TG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~d~sfD~V~~sf~ 149 (265)
T Consensus 1 M~I~IiGlGLiGgSla~alk~~-~~~~~V~g~d~~~~~~~~A~~----~g~id~~----~~~~~i----~~aDlVila~- 66 (275)
T PRK08507 1 MKIGIIGLGLMGGSLGLALKEN-KLISCVYGYDHNEEHEKDALD----LGLVDEI----VEFEEI----KECDVIFLAI- 66 (275)
T ss_pred CEEEEEECCHHHHHHHHHHHHC-CCCCEEEEEECCHHHHHHHHH----CCCCCCC----CCHHHC----CCCCEEEEEC-
T ss_conf 9899990087899999999950-998679999599999999998----6998610----673123----6579899917-
Q ss_pred ECCCHHHHHHHCCCCHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCHH---HHHHHHHCCCHHHHHHHHHH--HHHCC-
Q ss_conf 0132134432012100048521177630554455101123456531113---32102542887686578999--99689-
Q gi|254780624|r 150 IRNMPHITLVLQEIYRILKCGGRLLVLEFSEVQGPVFKKIYDMWSFKVI---PQLGRFIAGDEEPYQYLIES--IRRFP- 223 (265)
Q Consensus 150 l~~~~d~~~~l~e~~RvLKpGG~~~i~df~~p~~~~~~~~~~~y~~~ii---P~~g~~~~~~~~~Y~yL~~S--i~~f~- 223 (265)
T Consensus 67 --Pv~~~~~~l~~l~~-l~~~~i--itDv~SvK~~i~~~~~~~~~~~fVg~HPmAGsE~sG~~~a~~~LF~~~~~il~p~ 141 (275)
T PRK08507 67 --PVDAIIEILQKLLD-IKENTT--IIDLGSTKAKIIESIPKSIRKNFIAAHPMTGTEFSGPKAAFKGLYKGAVVVLCDL 141 (275)
T ss_pred --CHHHHHHHHHHHHH-CCCCCE--EEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECC
T ss_conf --69999999999860-467888--9834312899999998625688443499788875445441077853985999688
Q ss_pred --C----HHHHHHHHHHCCCCEE
Q ss_conf --9----8999999997599537
Q gi|254780624|r 224 --N----QQDFAAVISAAGFSNV 240 (265)
Q Consensus 224 --~----~~el~~~l~~aGF~~v 240 (265)
T Consensus 142 ~~~~~~~~~~~~~l~~~lGa~~~ 164 (275)
T PRK08507 142 EKSGEKHQERAKEIFSGIGMKIV 164 (275)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 88979999999999998199788