HHsearch alignment for GI: 254780624 and conserved domain: PRK09422

Probab=95.59  E-value=0.032  Score=34.51  Aligned_cols=106  Identities=12%  Similarity=0.245  Sum_probs=61.5

Q ss_pred             HHHHHHCCCCCCCCEEEECCHH-HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCC-CCC-CC
Q ss_conf             9985206446799779860233-55777776641388632787213322221111000001122222222222-333-45
Q gi|254780624|r   59 AMVTNLNPRKSKDYRVLDVAGG-TGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEAN-AET-LP  135 (265)
Q Consensus        59 ~~i~~l~~~~~~~~~iLDiGcG-TG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~d-a~~-lp  135 (265)
T Consensus       153 ~al~~~~~~~G~--~VlV~GaGgvG~~aiq~ak~~~-g~~Vi~~~~~~~k~~~a~~----lGad~vi~~~~~~~~~~~~~  225 (338)
T PRK09422        153 KAIKVSGIKPGQ--WIAIYGAGGLGNLALQYAKNVF-NAKVIAVDINDDKLALAKE----VGADLTINSKRVEDVAKIIQ  225 (338)
T ss_pred             HHHHHHCCCCCC--EEEEECCCHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH----CCCCEEECCCCCCCHHHHHH
T ss_conf             999984899998--8999688689999999999808-9869999899999999997----29989981887434999999


Q ss_pred             CCCCCCCCCEEEEEECCCHHHHHHHCCCCHHCCCCCEEEEEE
Q ss_conf             755446740366420132134432012100048521177630
Q gi|254780624|r  136 FEANSFDACTLAFGIRNMPHITLVLQEIYRILKCGGRLLVLE  177 (265)
Q Consensus       136 ~~d~sfD~V~~sf~l~~~~d~~~~l~e~~RvLKpGG~~~i~d  177 (265)
T Consensus       226 ~~~gg~~~~v~~-----~~~-~~~~~~~~~~l~~gG~~v~vG  261 (338)
T PRK09422        226 EKTGGAHAAVVT-----AVA-KAAFNQAVDAVRAGGRVVAVG  261 (338)
T ss_pred             HHCCCCCEEEEE-----CCC-HHHHHHHHHHHHCCCEEEEEC
T ss_conf             950997769996-----787-899999999811699999987