HHsearch alignment for GI: 254780624 and conserved domain: PTZ00146
>PTZ00146 fibrillarin; Provisional.
Probab=98.00 E-value=4.1e-05 Score=53.14 Aligned_cols=149 Identities=11% Similarity=0.189 Sum_probs=92.3
Q ss_pred CCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCC----CCCCCCCCCHHCCCCCCCCCCCCCCCCCCC-C--CCC
Q ss_conf 467997798602335577777664138863278721332----222111100000112222222222233345-7--554
Q gi|254780624|r 67 RKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINN----EMLSVGRDRAFKENLQDCITFIEANAETLP-F--EAN 139 (265)
Q Consensus 67 ~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~----~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp-~--~d~ 139 (265)
T Consensus 132 ~Ik~GskVLYLGAasGTTVSHVSDIVG~~G~VYAVEfSpr~~RdLl~lA~~R-------~NIvPIleDAr~P~kYr~lV~ 204 (296)
T PTZ00146 132 PIKPGSKVLYLGAASGTTVSHVSDLVGPEGVVYAVEFSHRSGRDLVEMAKRR-------TNIVPIIEDARYPQKYRMLVP 204 (296)
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCC-------CCCEEEECCCCCHHHHHHHCC
T ss_conf 4379998998514679865566650178861999970646688999997227-------983357777897467554245
Q ss_pred CCCCCEEEEEECCCHHHHH---HHCCCCHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHH
Q ss_conf 4674036642013213443---2012100048521177630554455101123456531113321025428876865789
Q gi|254780624|r 140 SFDACTLAFGIRNMPHITL---VLQEIYRILKCGGRLLVLEFSEVQGPVFKKIYDMWSFKVIPQLGRFIAGDEEPYQYLI 216 (265)
Q Consensus 140 sfD~V~~sf~l~~~~d~~~---~l~e~~RvLKpGG~~~i~df~~p~~~~~~~~~~~y~~~iiP~~g~~~~~~~~~Y~yL~ 216 (265)
T Consensus 205 ~VDvIf~-----DVAQpdQarI~~~Na~~FLK~gG~~~i~I----KArsID-----------------st~~p~~----- 253 (296)
T PTZ00146 205 MVDCIFA-----DVAQPDQARIVALNAQHFLKNGGHFVISI----KANCID-----------------STADPEV----- 253 (296)
T ss_pred CCCEEEE-----CCCCHHHHHHHHHHHHHHHHCCCEEEEEE----ECCCCC-----------------CCCCHHH-----
T ss_conf 5558996-----17876589999999998531698899999----726632-----------------5679899-----
Q ss_pred HHHHHCCCHHHHHHHHHHCCCCEEEEEEC---CCCEEEEEEEEEECC
Q ss_conf 99996899899999999759953799985---566499999981164
Q gi|254780624|r 217 ESIRRFPNQQDFAAVISAAGFSNVSFTNY---TNGVVALHSGWKCEN 260 (265)
Q Consensus 217 ~Si~~f~~~~el~~~l~~aGF~~v~~~~~---~~Gi~~i~~g~Kp~~ 260 (265)
T Consensus 254 ----VF--~~E-v~kL~~~~f~~~e~v~LePy~rdHa~vvg~Yr~~~ 293 (296)
T PTZ00146 254 ----VF--ASE-VQKLKKEGLKPKEQLTLEPFERDHAVVIGVYRVVK 293 (296)
T ss_pred ----HH--HHH-HHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCC
T ss_conf ----99--999-99998728963688704777788289999855776