HHsearch alignment for GI: 254780624 and conserved domain: TIGR00080
>TIGR00080 pimt protein-L-isoaspartate O-methyltransferase; InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase () (PCMT) (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyzes the transfer of a methyl group from S- adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerization of normal L-aspartyl and L- asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process.
Probab=98.70 E-value=1.7e-08 Score=74.89 Aligned_cols=111 Identities=23% Similarity=0.275 Sum_probs=84.5
Q ss_pred HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHC-----CCCCCCCCCCCCCCC
Q ss_conf 999852064467997798602335577777664138863278721332222111100000-----112222222222233
Q gi|254780624|r 58 EAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFK-----ENLQDCITFIEANAE 132 (265)
Q Consensus 58 ~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~-----~~~~~~i~~~~~da~ 132 (265)
T Consensus 70 A~m~~yL~nhL~~~~~vLeiG~GSGY~aavlA~~v~~~G~V~SiEri~~L~~~A~~~Lk~hhseqL~~-~NV~v~~GDG~ 148 (228)
T TIGR00080 70 AKMTEYLENHLKPGAKVLEIGTGSGYQAAVLAEIVGRDGLVVSIERIPELVEKARRRLKKHHSEQLGL-DNVIVIEGDGR 148 (228)
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCC-CCEEEEECCCC
T ss_conf 99999888521403556650478558999999987139718998535788999998765431444068-86589977886
Q ss_pred CCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCHHCCCCCEEEE
Q ss_conf 3457554467403664201321344320121000485211776
Q gi|254780624|r 133 TLPFEANSFDACTLAFGIRNMPHITLVLQEIYRILKCGGRLLV 175 (265)
Q Consensus 133 ~lp~~d~sfD~V~~sf~l~~~~d~~~~l~e~~RvLKpGG~~~i 175 (265)
T Consensus 149 ~G~~~~APYd~I~~~AA~k~i---P~A---L~~QL~eGG~L~~ 185 (228)
T TIGR00080 149 QGWEEKAPYDAILVTAAAKEI---PKA---LIDQLEEGGILVL 185 (228)
T ss_pred CCHHHCCCCCEEEEECCCCCC---CHH---HHHHHHHCCEEEE
T ss_conf 571024883527752378987---657---8999972898862