HHsearch alignment for GI: 254780624 and conserved domain: TIGR00406
>TIGR00406 prmA ribosomal protein L11 methyltransferase; InterPro: IPR004498 Ribosomal protein L11 methyltransferase (2.1.1 from EC) is required for the methylation of ribosomal protein L11. It forms a bifunctional operon in Escherichia coli with panF (pantothenate transport).; GO: 0008276 protein methyltransferase activity, 0006479 protein amino acid methylation.
Probab=98.89 E-value=3e-09 Score=79.73 Aligned_cols=118 Identities=21% Similarity=0.273 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHHCCCCCCC--CEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCC
Q ss_conf 801799999985206446799--779860233557777766413886327872133222211110000011222222222
Q gi|254780624|r 51 GLHRFWKEAMVTNLNPRKSKD--YRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIE 128 (265)
Q Consensus 51 G~~r~Wr~~~i~~l~~~~~~~--~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~ 128 (265)
T Consensus 176 GtH~T-T~LCLe~L~~~d~k~kh~~viD~GCGSGIL~IAa~~LGa--~~~~g~D~DP~Ave~~r~N~~lN~v~~~~~~~~ 252 (330)
T TIGR00406 176 GTHPT-TSLCLELLEDLDLKDKHKKVIDVGCGSGILSIAALKLGA--AKVVGIDIDPLAVESARKNAELNQVSDRLQVKL 252 (330)
T ss_pred CCCHH-HHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHH--HHEEEECCCHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 97457-899999874014777665478712671789999997512--311221377289999997687458864576432
Q ss_pred CCC--CCCCCCCCCCCCCEEEEEECCCHH-HHHHHCCCCHHCCCCCEEEE
Q ss_conf 223--334575544674036642013213-44320121000485211776
Q gi|254780624|r 129 ANA--ETLPFEANSFDACTLAFGIRNMPH-ITLVLQEIYRILKCGGRLLV 175 (265)
Q Consensus 129 ~da--~~lp~~d~sfD~V~~sf~l~~~~d-~~~~l~e~~RvLKpGG~~~i 175 (265)
T Consensus 253 ~~~vPe~~~~~e~~~DViVANi----LA~vi~~L~p~~~~L~~~~G~lil 298 (330)
T TIGR00406 253 ENSVPELEQPIEGKADVIVANI----LAEVIKELYPQFSRLVKPGGHLIL 298 (330)
T ss_pred CCCCCCCCCCCCCCCCEEEECC----HHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 0578753453225667578800----245787641355131068996574