HHsearch alignment for GI: 254780624 and conserved domain: TIGR00417

>TIGR00417 speE spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (), spermine synthase () and putrescine N-methyltransferase () . The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain . The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) . ; GO: 0003824 catalytic activity.
Probab=98.17  E-value=1.7e-06  Score=62.08  Aligned_cols=157  Identities=14%  Similarity=0.223  Sum_probs=107.5

Q ss_pred             HHHHHHHCC-CCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHC----CCCCCCCCCCCCCCC
Q ss_conf             999852064-467997798602335577777664138863278721332222111100000----112222222222233
Q gi|254780624|r   58 EAMVTNLNP-RKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFK----ENLQDCITFIEANAE  132 (265)
Q Consensus        58 ~~~i~~l~~-~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~----~~~~~~i~~~~~da~  132 (265)
T Consensus        62 hEMi~HvpL~~H~NPk~VLvIGGGDGG~lREV~KH~-sVE~~~lVdID~~VI~~srkyLP~~~~g~~dderv~~~i~DG~  140 (284)
T TIGR00417        62 HEMIAHVPLFAHPNPKKVLVIGGGDGGVLREVVKHK-SVEKATLVDIDEKVIELSRKYLPKLAAGSFDDERVDLAIDDGF  140 (284)
T ss_pred             HHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECC-CCCEEEEEECCHHHHHHHHHHCHHHHCCCCCCCEEEEEECCCH
T ss_conf             789987565368988547899638884687887559-8167999972747899988826121056658880358982517


Q ss_pred             C-CCCC-----CCCCCCCEEEEEECCCHHH---------HHHHCCCCHHCCCCCEEEEEECCC-CCCCHHHHHHHHHHHC
Q ss_conf             3-4575-----5446740366420132134---------432012100048521177630554-4551011234565311
Q gi|254780624|r  133 T-LPFE-----ANSFDACTLAFGIRNMPHI---------TLVLQEIYRILKCGGRLLVLEFSE-VQGPVFKKIYDMWSFK  196 (265)
Q Consensus       133 ~-lp~~-----d~sfD~V~~sf~l~~~~d~---------~~~l~e~~RvLKpGG~~~i~df~~-p~~~~~~~~~~~y~~~  196 (265)
T Consensus       141 ~fl~~~Gasdv~~~fDVIIv-D----stDPvGPa~~LF~~~Fy~~~~~aL~~~Gv~v~----Qss~s~~~~~~~------  205 (284)
T TIGR00417       141 KFLRDTGASDVEKKFDVIIV-D----STDPVGPAETLFTKEFYELLKKALNEDGVIVA----QSSESPWLQLEL------  205 (284)
T ss_pred             HHHHHCCCCCCCCCCCEEEE-E----CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE----ECCCCCCCCHHH------
T ss_conf             98976152222121447997-2----77895655410217999999985299988998----027884327488------


Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEE-----ECCCCEEEEEEEEEE
Q ss_conf             13321025428876865789999968998999999997599537999-----855664999999811
Q gi|254780624|r  197 VIPQLGRFIAGDEEPYQYLIESIRRFPNQQDFAAVISAAGFSNVSFT-----NYTNGVVALHSGWKC  258 (265)
Q Consensus       197 iiP~~g~~~~~~~~~Y~yL~~Si~~f~~~~el~~~l~~aGF~~v~~~-----~~~~Gi~~i~~g~Kp  258 (265)
T Consensus       206 ----------------------------~~d~~r~~~~~~F~~~~~y~~~iPTYp~G~~~F~~~s~~  244 (284)
T TIGR00417       206 ----------------------------IKDLKRKVKEVPFPITEYYTAAIPTYPSGLWSFIIASKN  244 (284)
T ss_pred             ----------------------------HHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCC
T ss_conf             ----------------------------887888775268975304664078650235453220242