HHsearch alignment for GI: 254780624 and conserved domain: TIGR02143
>TIGR02143 trmA_only tRNA (uracil-5-)-methyltransferase; InterPro: IPR011869 This family consists exclusively of proteins believed to act as tRNA (uracil-5-)-methyltransferase. All members of this entry belong to the Proteobacteria. ; GO: 0009021 tRNA (uracil-5-)-methyltransferase activity, 0008033 tRNA processing.
Probab=96.37 E-value=0.00071 Score=45.15 Aligned_cols=59 Identities=15% Similarity=0.372 Sum_probs=52.7
Q ss_pred EEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 798602335577777664138863278721332222111100000112222222222233345
Q gi|254780624|r 73 RVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLP 135 (265)
Q Consensus 73 ~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp 135 (265)
T Consensus 206 DLLELYCGNGNFsLaLA~~f~---rVLATEiaK~SV~aAq~Ni~~N~i-dNv~i~RlSAEEft 264 (361)
T TIGR02143 206 DLLELYCGNGNFSLALAQNFE---RVLATEIAKPSVNAAQYNIAANKI-DNVQIIRLSAEEFT 264 (361)
T ss_pred CCCEEECCCCCCHHHHHHHHH---HHHHHHCCCCCHHHHHHHHHCCCC-CCEEHHHHHHHHHH
T ss_conf 201000267531044565333---455430240247999999871798-83101023279999