HHsearch alignment for GI: 254780624 and conserved domain: TIGR03201
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.16 E-value=0.0058 Score=39.28 Aligned_cols=105 Identities=18% Similarity=0.256 Sum_probs=61.7
Q ss_pred HHHHCCCCCCCCEEEECCHH-HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC----
Q ss_conf 85206446799779860233-5577777664138863278721332222111100000112222222222233345----
Q gi|254780624|r 61 VTNLNPRKSKDYRVLDVAGG-TGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLP---- 135 (265)
Q Consensus 61 i~~l~~~~~~~~~iLDiGcG-TG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp---- 135 (265)
T Consensus 159 ~~~~~v~~g--~~V~V~G~G~iGl~a~~~ak~~G--a~Vi~vd~~~~rle~a~~~----Ga~~~i~~~~~~~~~~~~~~~ 230 (349)
T TIGR03201 159 AVQAGLKKG--DLVIVIGAGGVGGYMVQTAKAMG--AAVVAIDIDPEKLEMMKGF----GADLTLNPKDKSAREVKKLIK 230 (349)
T ss_pred HHHCCCCCC--CEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHC----CCCEEECCCCCCHHHHHHHHH
T ss_conf 631178999--88999897489999999999859--9799994999999999964----998998787677899999997
Q ss_pred -C-CCCCCC----CCEEEEEECCCHHHHHHHCCCCHHCCCCCEEEEEECC
Q ss_conf -7-554467----4036642013213443201210004852117763055
Q gi|254780624|r 136 -F-EANSFD----ACTLAFGIRNMPHITLVLQEIYRILKCGGRLLVLEFS 179 (265)
Q Consensus 136 -~-~d~sfD----~V~~sf~l~~~~d~~~~l~e~~RvLKpGG~~~i~df~ 179 (265)
T Consensus 231 ~~~~~~G~~~~~~~v~------e~~G~~~~~~~a~~~~~~gG~iv~vG~~ 274 (349)
T TIGR03201 231 AFAKARGLRSTGWKIF------ECSGSKPGQESALSLLSHGGTLVVVGYT 274 (349)
T ss_pred HHCCCCCCCCCCCEEE------EECCCHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 5414567565563699------8248889999999973589799997505