HHsearch alignment for GI: 254780624 and conserved domain: pfam02527
>pfam02527 GidB rRNA small subunit methyltransferase G. This is a family of bacterial glucose inhibited division proteins these are probably involved in the regulation of cell devision. GidB has been shown to be a methyltransferase G specific to the rRNA small subunit. Previously identified as a glucose-inhibited division protein B that appears to be present and in a single copy in all complete eubacterial genomes so far sequenced. GidB specifically methylates the N7 position of a guanosine in 16S rRNA.
Probab=98.53 E-value=1.8e-07 Score=68.36 Aligned_cols=119 Identities=18% Similarity=0.238 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHHHHCCC---CCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCC
Q ss_conf 80179999998520644---679977986023355777776641388632787213322221111000001122222222
Q gi|254780624|r 51 GLHRFWKEAMVTNLNPR---KSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFI 127 (265)
Q Consensus 51 G~~r~Wr~~~i~~l~~~---~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~ 127 (265)
T Consensus 26 ~~~~i~~rHi~DSl~~~~~~~~~~~~ilDiGSGaGfPGi~LAI~~-p~~~~~LvEs~~KK~~FL~~v~~~L~L-~nv~v~ 103 (184)
T pfam02527 26 EPNELLERHLLDSLVVLEYLDNIRIKVADVGSGAGFPGIPLAIAF-PDKKLTLLESLLKKINFLEELKKELNL-ENVTIV 103 (184)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHC-CCCEEEEEECHHHHHHHHHHHHHHCCC-CCEEEE
T ss_conf 989999999999999877426679868834798884679999967-785599992828999999999998599-976999
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCHHCCCCCEEEEE
Q ss_conf 2223334575544674036642013213443201210004852117763
Q gi|254780624|r 128 EANAETLPFEANSFDACTLAFGIRNMPHITLVLQEIYRILKCGGRLLVL 176 (265)
Q Consensus 128 ~~da~~lp~~d~sfD~V~~sf~l~~~~d~~~~l~e~~RvLKpGG~~~i~ 176 (265)
T Consensus 104 ~~R~E~~~~-~~~~D~v~a----RA~a~l~~ll~~~~~~l~~~g~~i~~ 147 (184)
T pfam02527 104 HARAEEYQH-EEQYDVITS----RAVASLNELTEWALPLLKPGGYFLAY 147 (184)
T ss_pred ECCHHHCCC-CCCCCEEEE----CHHCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf 560441464-467878998----10057999999999863889899998