HHsearch alignment for GI: 254780624 and conserved domain: pfam03141
>pfam03141 DUF248 Putative methyltransferase. Members of this family of hypothetical plant proteins are probably methyltransferases: several of the aligned sequences either match the methyltransferase profile, or contain a SAM-binding motif. A protein from Arabidopsis thaliana contains both. Several family members are described as ankyrin like.
Probab=91.79 E-value=0.34 Score=27.91 Aligned_cols=112 Identities=20% Similarity=0.335 Sum_probs=62.1
Q ss_pred HHHHHHHHHH---HCC--CCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCC----CCCCCCCCHHCCCCCCCC
Q ss_conf 7999999852---064--4679977986023355777776641388632787213322----221111000001122222
Q gi|254780624|r 54 RFWKEAMVTN---LNP--RKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNE----MLSVGRDRAFKENLQDCI 124 (265)
Q Consensus 54 r~Wr~~~i~~---l~~--~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~----Ml~~a~~r~~~~~~~~~i 124 (265)
T Consensus 344 ~~Wk~~V~~Y~~l~~~~i~~~~~RNVMDMnA~~GGFAAAL~~~-----~vWVMNVVP~~~~nTL~v----IydRGLiG-- 412 (506)
T pfam03141 344 ELWKRRVSKYKRLLKLLIDKGRVRNVMDMNAGFGGFAAALIDD-----PVWVMNVVPVDSPDTLPV----IYDRGLIG-- 412 (506)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCC-----CEEEEEECCCCCCCCCCE----EEECCCCC--
T ss_conf 9999999999987402255676012221244421588986379-----804998355899987545----87544210--
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEE---CCCHHHHHHHCCCCHHCCCCCEEEEEE
Q ss_conf 22222233345755446740366420---132134432012100048521177630
Q gi|254780624|r 125 TFIEANAETLPFEANSFDACTLAFGI---RNMPHITLVLQEIYRILKCGGRLLVLE 177 (265)
Q Consensus 125 ~~~~~da~~lp~~d~sfD~V~~sf~l---~~~~d~~~~l~e~~RvLKpGG~~~i~d 177 (265)
T Consensus 413 -~yHDWCE~FsTYPRTYDLlHA~~lfS~~~~rC~~~dillEMDRILRP~G~vIiRD 467 (506)
T pfam03141 413 -IYHDWCEPFSTYPRTYDLLHADHLFSLYKKRCNLEDILLEMDRILRPGGAVIIRD 467 (506)
T ss_pred -EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC
T ss_conf -1002245578888507777353234776178658999988876006881499946