HHsearch alignment for GI: 254780624 and conserved domain: pfam03141

>pfam03141 DUF248 Putative methyltransferase. Members of this family of hypothetical plant proteins are probably methyltransferases: several of the aligned sequences either match the methyltransferase profile, or contain a SAM-binding motif. A protein from Arabidopsis thaliana contains both. Several family members are described as ankyrin like.
Probab=91.79  E-value=0.34  Score=27.91  Aligned_cols=112  Identities=20%  Similarity=0.335  Sum_probs=62.1

Q ss_pred             HHHHHHHHHH---HCC--CCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCC----CCCCCCCCHHCCCCCCCC
Q ss_conf             7999999852---064--4679977986023355777776641388632787213322----221111000001122222
Q gi|254780624|r   54 RFWKEAMVTN---LNP--RKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNE----MLSVGRDRAFKENLQDCI  124 (265)
Q Consensus        54 r~Wr~~~i~~---l~~--~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~----Ml~~a~~r~~~~~~~~~i  124 (265)
T Consensus       344 ~~Wk~~V~~Y~~l~~~~i~~~~~RNVMDMnA~~GGFAAAL~~~-----~vWVMNVVP~~~~nTL~v----IydRGLiG--  412 (506)
T pfam03141       344 ELWKRRVSKYKRLLKLLIDKGRVRNVMDMNAGFGGFAAALIDD-----PVWVMNVVPVDSPDTLPV----IYDRGLIG--  412 (506)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCC-----CEEEEEECCCCCCCCCCE----EEECCCCC--
T ss_conf             9999999999987402255676012221244421588986379-----804998355899987545----87544210--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCEEEEEE---CCCHHHHHHHCCCCHHCCCCCEEEEEE
Q ss_conf             22222233345755446740366420---132134432012100048521177630
Q gi|254780624|r  125 TFIEANAETLPFEANSFDACTLAFGI---RNMPHITLVLQEIYRILKCGGRLLVLE  177 (265)
Q Consensus       125 ~~~~~da~~lp~~d~sfD~V~~sf~l---~~~~d~~~~l~e~~RvLKpGG~~~i~d  177 (265)
T Consensus       413 -~yHDWCE~FsTYPRTYDLlHA~~lfS~~~~rC~~~dillEMDRILRP~G~vIiRD  467 (506)
T pfam03141       413 -IYHDWCEPFSTYPRTYDLLHADHLFSLYKKRCNLEDILLEMDRILRPGGAVIIRD  467 (506)
T ss_pred             -EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             -1002245578888507777353234776178658999988876006881499946