HHsearch alignment for GI: 254780624 and conserved domain: pfam03492

>pfam03492 Methyltransf_7 SAM dependent carboxyl methyltransferase. This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine. Caffeine is synthesized through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyses the second step to produce theobromine.
Probab=97.35  E-value=0.0032  Score=40.90  Aligned_cols=172  Identities=12%  Similarity=0.115  Sum_probs=81.1

Q ss_pred             CCCCCEEEECCHHHHHHHHHHHH--------HC-------CCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCC---
Q ss_conf             67997798602335577777664--------13-------8863278721332222111100000112222222222---
Q gi|254780624|r   68 KSKDYRVLDVAGGTGDVAFRIAE--------AS-------DNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEA---  129 (265)
Q Consensus        68 ~~~~~~iLDiGcGTG~~~~~l~~--------~~-------~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~---  129 (265)
T Consensus        14 ~p~~~~IADlGCSsGpNtl~~vs~ii~~i~~~~~~~~~~~~pE~qvf~NDLP~NDFNtlF~sLp~~~~~~~~~f~~gvpG   93 (331)
T pfam03492        14 FPNSIKIADLGCSSGPNTFLAVSNIIDTVEKKYQKENILEPPEFQVFFNDLPSNDFNTLFKLLPPFQKKKRSYFVSGVPG   93 (331)
T ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCHHHCCCCCEEEEECCC
T ss_conf             99855999817999752899999999999999864179999738998678998627888740840113788769996586


Q ss_pred             CCCCCCCCCCCCCCCEEEEEECCCHHHHHHH-----------------------CCCC----------------HHCCCC
Q ss_conf             2333457554467403664201321344320-----------------------1210----------------004852
Q gi|254780624|r  130 NAETLPFEANSFDACTLAFGIRNMPHITLVL-----------------------QEIY----------------RILKCG  170 (265)
Q Consensus       130 da~~lp~~d~sfD~V~~sf~l~~~~d~~~~l-----------------------~e~~----------------RvLKpG  170 (265)
T Consensus        94 SFy~RLfP~~Slh~~~Ss~slHWLS~vP~~l~~~~~~~~Nkg~I~i~~~s~~~V~~AY~~Qf~~D~~~FL~~Ra~Elv~G  173 (331)
T pfam03492        94 SFYGRLFPRNSLHFVHSSYSLHWLSQVPKGLEDKESPAWNKGNIYISGASPEEVYKAYLDQFKKDFSLFLRARAEELVSG  173 (331)
T ss_pred             CCCCCCCCCCCEEEEEEHHHHHHHHHCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             43255578764588753225677640870010678755678856971699889999999999999999999889985468


Q ss_pred             CEEEEEECCCCCCCHH----HHHHHHHHHCHHHHHHHHHCCCHHHHH--HHHHHHHHCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf             1177630554455101----123456531113321025428876865--789999968998999999997599537999
Q gi|254780624|r  171 GRLLVLEFSEVQGPVF----KKIYDMWSFKVIPQLGRFIAGDEEPYQ--YLIESIRRFPNQQDFAAVISAAGFSNVSFT  243 (265)
Q Consensus       171 G~~~i~df~~p~~~~~----~~~~~~y~~~iiP~~g~~~~~~~~~Y~--yL~~Si~~f~~~~el~~~l~~aGF~~v~~~  243 (265)
T Consensus       174 G~mvl~~~Gr~~~d~~~~~~~~~~~ll~~aL~dlv~eGlI-~eekldsFNiP---~Y~ps~eEv~~~Ie~eGsF~I~~l  248 (331)
T pfam03492       174 GLMVLTFLGRPSVDPSETECGIFWDLLGDALNDLVSEGLI-EEEKLDSFNIP---IYAPSPEEVKEIIEKEGSFTIERL  248 (331)
T ss_pred             CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC-CHHHHHHCCCC---CCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf             6599996056899866566443999999999999985996-79998324887---607999999999710697565677