HHsearch alignment for GI: 254780624 and conserved domain: pfam03602

Probab=97.98  E-value=1.1e-05  Score=56.69  Aligned_cols=113  Identities=19%  Similarity=0.270  Sum_probs=75.2

Q ss_pred             HHHHHHHHCCC-CCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC--
Q ss_conf             99998520644-679977986023355777776641388632787213322221111000001122222222222333--
Q gi|254780624|r   57 KEAMVTNLNPR-KSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAET--  133 (265)
Q Consensus        57 r~~~i~~l~~~-~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~--  133 (265)
T Consensus        29 rEalFniL~~~~~i~~~~~LDLFaGSGslglEAlSRGA--~~v~fvE~~~~a~~~i~~N~~~l~~~~~~-~~~~~~~~~~  105 (181)
T pfam03602        29 REALFNILAPYFELGGARVLDLFAGSGALGLEALSRGA--SSVVFVEKDKKAVATLKENLEALGLEGAV-LRMDAARALL  105 (181)
T ss_pred             HHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHHCCCCEE-EECCHHHHHH
T ss_conf             99999750134554898799827872698999997699--88999969999999999999985899779-9810899998


Q ss_pred             -CCCCCCCCCCCEE--EEEECCCHHHHHHHCCC--CHHCCCCCEEEE
Q ss_conf             -4575544674036--64201321344320121--000485211776
Q gi|254780624|r  134 -LPFEANSFDACTL--AFGIRNMPHITLVLQEI--YRILKCGGRLLV  175 (265)
Q Consensus       134 -lp~~d~sfD~V~~--sf~l~~~~d~~~~l~e~--~RvLKpGG~~~i  175 (265)
T Consensus       106 ~~~~~~~~fdiIF~DPPY~~---~~~~~~l~~l~~~~~l~~~~iiii  149 (181)
T pfam03602       106 RLAGKGPPFDLVFLDPPYAK---GLIEEALELLAEKGWLNPNALIVV  149 (181)
T ss_pred             HHCCCCCCCCEEECCCCCCC---HHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             75335788876635997542---069999999996666579809999